Tigriopus californicus (tidepool copepod): 131880249
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Entry
131880249 CDS
T09700
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131880249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131880249
Spliceosome [BR:
tcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131880249
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
131880249
NCBI-ProteinID:
XP_059082810
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All DBs
Position
5:7317952..7320227
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AA seq
513 aa
AA seq
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MSLADELLADLEEESYPEEDSETGPVLPGDEDSMEQGSSGALTAAQSRGFDASMSEDVGT
KLTLKSIARLVSSHDYVDIMSHIKASQDRELTAHLFAGPVEANPEYQFIVRANDIAAKID
DEIGEIYKFAKDIYSKRFPELETLVGPPLDYLVTAKELQNNILKAKNVKYLEQILNPATI
MVVSVTASTTQGKDLEESELKELDAACDMALQLSEAKASILAFVESCMTFIAPNLSVIVG
ASIAAKLMGAAGGLTPLSKMPSGYIALLGQQKKSLNGFSQRTTLPHTGFIFSSQLVQNVP
PDVRRKVARVVADKCTLAARVDACHESAEGKIGHNFLLEIERKIDKFLEPPPVKAIKALP
TPIEAPKKKRGGRRVRNQKERYAVTELRKQANRMNFGELEEDVYQDDLGYSRGNIGKGSV
GAGLRMAQIDERTKVRISQTLKRNLQKQQATWGGTTSIKKQISGTASSVAFTPLQGLEIV
NPSAAENKDDSNQKYFSTSAAFVKVQTPAPKTT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccttagccgacgaattactagccgatttggaggaggaatcctacccggaggaggat
tccgagaccggacccgtgcttccgggcgatgaagacagcatggagcaaggatcgagcggc
gcactcaccgcggctcaatcccgtggttttgatgcgagcatgtccgaagatgtggggacc
aagttaacgctcaagtcgatcgcgcgattggtgagttcgcatgattacgtggatatcatg
agtcacatcaaggcctcacaagaccgagaattgaccgctcatttgttcgccggacccgtg
gaagctaatcccgaatatcagttcatcgtgcgagccaatgacattgcggccaaaatcgat
gacgaaatcggcgaaatctacaaatttgcgaaggatatctactcgaagcgatttccggag
ctagagacattggtgggaccgcctttggattacttagtgacagccaaagagctccagaac
aacatcctcaaggccaagaacgtgaaatacttggagcaaatcctcaacccggccacaatt
atggttgtgtcagtcacagcctccaccactcaaggaaaagacttggaggaatcggaactg
aaagaattggatgcggcttgcgatatggccctacagttgagcgaggccaaggctagcatc
ttggcctttgtcgagagttgtatgacgtttattgcacctaacttatcagtgattgtgggc
gcctccatcgcagccaaactaatgggtgcggccggtggattgacacccctttccaaaatg
ccctcaggttacatcgctttgttaggccaacagaaaaagagtctcaatggattctcgcaa
cgaaccacccttccacacactggattcattttctcctcacaattggtccaaaatgtccca
ccggatgtgcgccggaaagtggcccgtgtggtggctgataaatgtactttggctgccagg
gtagatgcttgccacgaatccgccgaggggaagatcggtcataatttcttgctggagatt
gagcgtaaaattgacaagtttctcgagccgcctcccgtgaaagccatcaaggccttgccc
actcccattgaagcgcctaagaagaagcgaggcggacggcgggttcgcaatcagaaagaa
cgatatgcggtcaccgagttaagaaagcaagctaatcggatgaactttggagagctcgaa
gaggatgtctatcaagatgatttgggctactcgcgaggcaatattggcaaaggcagtgtg
ggggctgggctccggatggctcagattgatgagcggaccaaggttaggatctctcaaacg
cttaaacggaacctccagaagcaacaagctacttggggcggaaccacgtcgatcaagaag
caaatctcgggcacggcatccagcgtggcatttacgcccttgcaaggactcgagatcgtg
aatcctagtgcggctgagaacaaagatgattcgaatcaaaagtatttttccacttctgcc
gcatttgtcaaagttcaaacccctgcccccaaaaccacttga
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