KEGG   Tigriopus californicus (tidepool copepod): 131880260
Entry
131880260         CDS       T09700                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131880260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcf03021]
    131880260
   03036 Chromosome and associated proteins [BR:tcf03036]
    131880260
Transcription machinery [BR:tcf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     131880260
   Coactivators
    SAGA/TFTC/STAGA complex
     131880260
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     131880260
    STAGA complex
     131880260
    TFTC complex
     131880260
    SAGA complex
     131880260
    SLIK complex
     131880260
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF DUF5947 TFIID-31kDa CENP-T_C
Other DBs
NCBI-GeneID: 131880260
NCBI-ProteinID: XP_059082829
LinkDB
Position
5:complement(14557942..14559880)
AA seq 167 aa
MSHPTVSLGLNPSGGPTAVVSAPPIAVNGASIVGLDAGSGASGSSGATTTPSPAGGAPSA
QILDKHRLNELVKEVDVHEQLDEDVEDLLLHIADDFIEQTVTASCALARHRKAPAIEVRD
VQMVLERNWNMYIPGFGTEDIRQHKRSALNESHKSRMALIRKTMKKY
NT seq 504 nt   +upstreamnt  +downstreamnt
atgtcgcacccaaccgtttctttgggtctgaatcccagtggcgggcccaccgccgtggtc
tcggctccgcctatcgccgtcaacggcgcctcaatcgtcggtctagacgcgggcagtggg
gcttcgggttcctcaggggccacaaccacgccatcgccggccggtggcgcgccctcggcc
caaatcttggacaagcatcgcctgaacgaattggtcaaggaggtggacgtgcacgagcaa
ttggacgaggacgtggaggacctgttgctgcacattgccgatgactttattgagcaaacc
gtgacggcctcgtgcgccttggcccgacaccgaaaggccccagccatcgaggtccgggac
gttcaaatggtcttggagcgaaattggaatatgtacatacctgggtttggaacggaagat
atccgacaacacaagcgttcggcgctcaacgaatcacacaaatcccgaatggcgctcatt
cggaaaactatgaaaaaatactga

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