Tigriopus californicus (tidepool copepod): 131880262
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Entry
131880262 CDS
T09700
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4-like
KO
K22991
WD repeat-containing protein 45
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131880262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131880262
Membrane trafficking [BR:
tcf04131
]
Autophagy
Other autophagy associated proteins
Others
131880262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WD40_CDC20-Fz
NBCH_WD40
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
131880262
NCBI-ProteinID:
XP_059082834
LinkDB
All DBs
Position
1:complement(4998776..5001526)
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AA seq
396 aa
AA seq
DB search
MASTTPRHLAPSPHAVSPPSAGGHSRLGLADGWGVITSLRFNQDFGGFSATLQDTPGGVG
PVRGGFRLFNVDPIRELAHVPSAQVGSIVRAEMLHRTNLIALIPSGLPTPHGPVFAENTV
MIYDCEKKTMRVEFTLPEKVLSVRVKRDKLIAVCRFSITVFSFPNRCQTLFTISTRDNPR
GLCEVSPMRSLSSSDLEFMAFPGYKTGSVQLIDLATTEQHVSSAPVTINAHQSQLWCLAI
NQQGTMIATASEKGTLIRIWDAAKRQMLVELRRGTDQARLYCINFSVSNEWLCCSSDKGT
VHIFALQNYSLNKRSNFSKFGLPGAYAGSQWSLASFTVPQEVACICAFGPQDTIFAACLD
GSFHKYIFTADGKCDQVAYDVFTDMWEDSAWDALRR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaccacgccccgtcatctagcgccctccccgcacgccgtgtccccgccctcg
gctggaggccattcacggttgggtttggctgatggctggggcgtcatcacttccttacgt
ttcaatcaggatttcggaggcttctcggccactttacaagacacgcctggcggtgtgggc
ccggttcgaggcgggttccgcctctttaatgtggatcccatccgggaattggcccatgtg
ccctctgcccaggtgggttccatcgttcgagccgagatgcttcatcgcaccaatttgatc
gccttgatcccctcaggcctgcccacgccccatggacccgtgtttgccgagaataccgtc
atgatatacgattgcgaaaagaaaaccatgcgcgtcgagttcactttacccgaaaaggtc
ctctcggttcgagtcaaaagggataaactcatcgctgtgtgccgatttagcatcacggtg
ttcagctttcctaatcgttgtcaaacgctcttcaccatttccacccgggacaatccccgc
gggttatgcgaggtcagtcccatgcgatctttgtcgtcctctgacttagagttcatggct
ttcccgggctacaaaacgggcagtgttcaattaatcgatttggccacgaccgagcaacac
gtctcatcggctccggtcacgatcaatgctcatcaaagtcaattgtggtgcctggccatc
aatcaacagggaacgatgattgccaccgccagtgagaaaggtaccttaatccgcatttgg
gatgcggccaaacgtcagatgttggttgagcttcgccgtggcacggatcaggcgcgattg
tactgcataaacttttccgtgtccaacgaatggttatgttgttcttcggacaagggaaca
gttcatatattcgccttgcagaattacagtttgaacaagcgatccaatttctcgaaattc
ggtttaccaggagcgtatgccggatcccaatggtcattggccagttttactgttccccaa
gaggtggcttgcatctgcgcatttggcccgcaggatacgattttcgcggcttgtttggat
ggatcgtttcacaagtatatctttactgcggatggcaaatgtgatcaagtggcttatgat
gttttcacggatatgtgggaagactccgcatgggacgctcttagacgttaa
DBGET
integrated database retrieval system
