Tigriopus californicus (tidepool copepod): 131880286
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Entry
131880286 CDS
T09700
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00020
Citrate cycle (TCA cycle)
tcf00640
Propanoate metabolism
tcf01100
Metabolic pathways
tcf01200
Carbon metabolism
Module
tcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
131880286
00640 Propanoate metabolism
131880286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131880286
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
131880286
6.2.1.5 succinate---CoA ligase (ADP-forming)
131880286
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131880286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
Citrate_bind
GARS_A
Ligase_CoA_2
Motif
Other DBs
NCBI-GeneID:
131880286
NCBI-ProteinID:
XP_059082855
LinkDB
All DBs
Position
5:complement(5443449..5464854)
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AA seq
430 aa
AA seq
DB search
MPILSKTLTSFLYKSSPALLGAASGPSTTIGQQAVRHLDLLEYQAKGLLQDHAVTVQKFR
VAANKSEAENIPKEFPCDEYVIKAQVLAGGRGKGHFDNGFKGGVHLTKDPKKVPDLVTSM
IGNRLITKQTPKDGIPVSKVMVAEAIDITRETYFCIVMDREHNGPVIVCSPDGGMDIEEV
AEKTPDRIKKIPVGISTGCTPAVANEVADFLGFKGELKSQCAEQVQRLYDMFVKVDCLQL
EVNPLAETPQGKIYTADAKLGFDDNAAFRQKAIFDMEDTTESDPREVEAASYNLNYVQMD
GNIGCLVNGAGLAMATMDIIKLYGGEPANFLDVGGSVQEHQVKEAFRIISEDSKVKAILV
NVFGGIVNCATIANGVVNACRSIDLKLPLVVRLEGTNVDEAKKILADSGLPIQSALNLDD
AAQKACAALK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctaagcaaaactttgacctcgttcttgtacaagagctctccggctctcttg
ggagcagcctcgggtccttcgacgaccattggtcaacaagccgtgagacatctcgatctt
ttggaatatcaagccaagggacttctccaggatcatgccgtgaccgttcagaagtttcgt
gtggctgcgaacaagagcgaggctgaaaacattcccaaggagtttccctgtgatgagtat
gttattaaggcgcaagttttagccggaggtcgaggcaaaggacacttcgacaatggattc
aagggaggcgttcatttgaccaaggatcccaagaaagtcccggatttggtcaccagcatg
attggaaaccgccttatcacaaagcagactccaaaggacggaattccagtctctaaggtg
atggtggccgaggccatcgatattacccgagaaacctatttctgcattgtaatggatcgt
gagcacaatggtccagtgattgtgtgctcgcccgatggaggcatggacattgaggaagtc
gccgaaaaaacgcctgatcgtatcaagaagatccccgtgggcatttccactggatgcacc
ccagccgtggccaatgaggtggccgatttcttgggcttcaaaggcgaactgaagagtcaa
tgtgctgagcaggttcaacgcttgtatgacatgtttgtgaaggtggactgtcttcaattg
gaggtgaaccctttggctgagactccccagggtaagatttataccgccgatgccaagttg
ggtttcgatgataatgccgcattccgacaaaaggccattttcgacatggaagacaccacg
gaatccgacccaagggaggtcgaagccgcctcttacaacctcaactacgttcagatggac
ggaaatatcggatgcctggtgaatggagctggcttggccatggccacaatggacatcatc
aaactttatggtggagagccagctaactttttggacgttggcggatctgtccaggagcat
caggtgaaggaggctttccgcatcattagcgaagactccaaagtcaaagccattctggtg
aatgtgtttggcgggattgtgaactgtgccaccatcgctaacggtgtggtgaatgcgtgt
cgctccattgacctcaagttaccgttggtggttcgtttggaaggaaccaacgtggatgag
gccaagaagatcctggccgattctgggctcccaattcaaagtgccctgaatttggatgac
gccgctcaaaaagcgtgcgctgctttgaagtag
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