Tigriopus californicus (tidepool copepod): 131880290
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Entry
131880290 CDS
T09700
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131880290
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131880290
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
131880290
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
131880290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
PDS5
Cnd1
HEAT_DAAF5
Proteasom_PSMB
TetR_C_38
Motif
Other DBs
NCBI-GeneID:
131880290
NCBI-ProteinID:
XP_059082861
LinkDB
All DBs
Position
5:8578434..8588301
Genome browser
AA seq
1217 aa
AA seq
DB search
MEGFLAQMSTSDTKRKVSLGQEMITFLGQAEPGDVTHSPELGAVIDALVPWVQSSNYKVC
QNGLDIVGLLVERMGHSFRSYLGTVLVPTLDRLGDARESVREKAHNGLKLFMREVVDPQT
LFDKLSTGFTHKNAKVREEVLFLVQDTLNEHGAHSLVISKMMHQIVNLASDPAAPVRDAA
MTTLVEIYRHVGERVQSDLERKFQLPQAKLAVLLSKFDELRKSGEVVESPPLPDNQRGKD
ETDLVQSKSLTSKARSSSVPAGVRRPGSFAVPKAPTADTNSNVMTTSSCIRRNSSMRGAT
APSSMGAGGLDEDSFTKSFEEVKHVNIFSGRALSEEIAKIKETLSKSSNDWKSRVDALQM
VRSLMLAGALNFDEMHNSLRTLDVPFQVSIKDLRSQVVREACITVAYLSQQMGHKVDRLL
EILFQNIINLIPNSAKVMSSSGIICIRFIIQNTFSSRFVPIITCNVTSKSRDIRRHCCEF
LDLILHSWPTQSLEKHAHLIQEAIKKGIADADPEARQFARKAYWGFADHFKDQADQLLTT
LDFSYRRLLQAGDISNSSSSNSLNMAGKATSTIPRSRQTSVANSRENISESTDGRRANTL
TRKSSGIPQYALTSPIKIASTPPMFSQESSPSLRSTPMTARSNSAIDASAVRRANVRAQY
AQRSRMGAMSGTLGSRSRRSSMEKTHNTPGGFNSPDVTNGTFSRNGRNRSRIGIVHSQPG
SRSTSPSSLRAYQTYFDSPPARVVPDKRRSSNGIPGSSTSSREPSPGRGVSSIKKRTVGK
SERFSPGPPSVTKSRPPKQPLMTENILRQSREAETALAYALNSQAERRKPAASFPFEDAS
DESEVSSVSSIGQSGHSPMKPRHIQSTNSLKGSNYSRPLANNNSRANTHLDPVNDSENLN
PEDVHKNLRFTASAIQNYSFDSPGDLSDGSKFNLVNNAAPTLEEKMRMLDSRVSSVEESQ
SGNSIISTDPTRANLEMEDIMEILQSVKSGTKAAERRTCMTHLIRLTREGTVKQIQDNFR
TILRLLLENLLDDVGATRALVYGVLTEMLKHEALSQSFQAFTELIILKVLEAHRDQEKDV
ERAAEGCAAAMAFILPSDIVIRVLNPIIKTGDFPVNQAAVKMLTKVADHQKSYDSIVANL
SDIMPGLLKAYDNVESSVRKAAVFCMVSLHQRVGDELQPHLECLNGSKLKLLNLYIKRAQ
SQKEQSMPSSPRLQTPM
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcttcttggcccaaatgagcacgagcgacaccaagcgcaaggtgtccctcgga
caagagatgatcaccttcttgggtcaggccgaacccggcgatgtgacccacagtcccgag
ttgggggccgtgatcgatgccctcgtaccctgggtccaatcttcgaattacaaggtctgc
caaaatggtttggatattgttgggcttttggtcgaacgcatgggtcactctttccgatct
tacctcgggactgtattggttcctacgctggatcgcttgggcgatgccagagagagtgtg
cgagaaaaagcccacaatggcttgaaattatttatgcgggaagtagtggatcctcaaacc
ctgtttgacaaactctcaacaggtttcacgcataagaatgccaaggtccgggaagaggtt
ctatttctggttcaagataccctgaacgaacatggagcacatagtttggttatctcgaaa
atgatgcaccaaattgttaatttggcatcagatcctgcagccccggtgcgtgatgcggcc
atgacaacgctggtcgaaatttataggcacgtgggagaaagggttcaatccgatctggaa
aggaaattccaattgccacaagccaaattggctgtgttgttatcaaagtttgacgaattg
agaaaatctggcgaggtcgtggaatcacctccgttgcctgacaatcagaggggaaaagac
gaaactgatctggttcagagcaagagcctaacatcaaaggcccgttcaagcagtgttcct
gctggcgtgagaagaccaggttcgtttgctgtgcctaaagctccaacagcagatactaac
tcaaatgtgatgactacatcttcttgcattcgtcggaactcctccatgagaggtgccaca
gcaccgtcttctatgggtgctggtggattggatgaagacagtttcacgaaatcttttgaa
gaggtgaaacatgtgaatatattctcaggtcgagctctttcagaggaaattgccaagatc
aaagagaccctttccaagtcatcgaatgattggaaatctcgtgttgatgctctccaaatg
gtgagatcactgatgttggcaggtgcattaaatttcgacgagatgcataactcattaaga
actttggatgtgcctttccaagtcagtatcaaggatttgcgatcacaggttgtaagagag
gcttgtataactgttgcctacctttcccaacaaatgggtcataaggtagaccgtttgttg
gagattctgtttcaaaatatcataaacctcattccgaattctgccaaagtgatgtcctcc
tctgggattatttgtattcggttcatcattcagaatacgttttcttcgagatttgttcca
atcatcacttgcaatgtgacctccaaatctcgtgatattcgaagacattgttgtgaattc
ttggatctaatcctgcattcttggcccacgcaaagcttagagaagcatgcacatctcatt
caagaagccattaaaaaaggaattgccgatgcagatccagaggccaggcaatttgcgaga
aaggcgtactggggatttgcagatcatttcaaagaccaagccgatcagcttttgacaacc
ttggacttttcgtatcgaagactattgcaagctggagacatctccaactcctcgtcaagt
aactccttgaacatggctggaaaagcaacatctaccataccccgatctaggcagacatcg
gtagcgaattcgagagaaaacatttccgaatcaaccgatggaagacgagcaaacacactg
acgagaaagtccagtggaattcctcaatatgcattgacgtcgcccatcaaaatagcgagt
actccacccatgttctctcaagagtccagtccaagtttgagatcgacccctatgactgcc
agatccaatagtgccattgacgcctccgctgttcgtcgagccaatgttcgggctcaatat
gcacaaaggagtaggatgggagcgatgtctggtaccttgggatctcgatcccgaagaagc
tctatggaaaagacccataataccccaggaggatttaattcaccggacgtgacaaacggc
acattttctcggaacggaagaaatcgctctcgcattggaatcgttcactcgcaaccgggc
tcaagatcgacctctccatcatcactacgagcgtaccagacttattttgactcgcctcca
gctcgagtagtgcctgacaaacgtcgctcttccaatggaatcccggggagctccacctct
tctcgggagccaagtcctggccgaggagtttcctctatcaagaaaagaaccgttgggaaa
agtgagaggttttctcctggaccgccttcagtaaccaaaagccgcccacctaaacaacca
cttatgaccgaaaacatacttcgccagtctagagaagctgaaactgccctggcatatgca
ttgaactcacaagccgaaagaagaaaacccgcggcaagctttccattcgaagacgcatca
gatgaaagtgaggtgtcgagtgtgagttccataggccagagtgggcattcgccaatgaaa
ccaagacacatccagtccacgaattccttgaaaggatccaactattcacggcctttggcc
aataacaactccagagcgaacacgcacttggatcctgtaaatgattccgaaaatctgaat
cccgaagacgttcacaagaatttgcgttttaccgccagtgccatacaaaactattccttt
gattctcccggagatttatctgatggatcaaaattcaatctcgttaataatgcggcccct
acgttggaagagaagatgaggatgctcgattcccgagtgagtagtgttgaagaatcgcag
agtggcaattcaattatatctacagatccaactagggctaacctagaaatggaagatata
atggaaattcttcaaagtgtcaaatcgggaactaaagcagctgagcggagaacgtgcatg
actcacttgattcgcctcacccgggaaggaactgtcaaacaaatccaagataacttccgc
acaattctgcggcttctcctggagaacctattagatgacgtgggagcgacaagagctctt
gtttatggcgttttgacagagatgctcaaacacgaagcattgtcccaaagctttcaagcc
ttcaccgaactaatcatattgaaagtcttggaagctcatcgggatcaagaaaaagatgtt
gagagagctgcagagggatgtgcagcagccatggcttttattcttccatctgacattgtg
ataagggttctaaaccctatcatcaagaccggagacttccctgttaatcaagctgccgtc
aaaatgcttacgaaagtagctgatcatcaaaaaagttacgattctattgtggccaatctg
tcggatatcatgccagggctattaaaggcttatgataacgtggaatccagtgtgagaaag
gctgccgttttctgcatggtgtccttgcaccaacgcgttggtgacgagctccaaccccac
ttggaatgtctcaatggaagcaagctcaaattgttaaatttgtacattaaaagagctcag
tcacaaaaagaacagtcaatgccaagtagtccaagacttcaaacgccgatgtga
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