Tigriopus californicus (tidepool copepod): 131880340
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Entry
131880340 CDS
T09700
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131880340
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131880340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_like
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
131880340
NCBI-ProteinID:
XP_059082927
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All DBs
Position
5:8333385..8336079
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AA seq
635 aa
AA seq
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MPKVWSEYLFDRSLGATSPVRGGAWSHGQCLAQLHQSWTGPGSVGAAQDARPATTSYRGL
ALEPSLAGGIYNLDYNPDGSVVVAACEQRNILLCDPRLQRVVNIVYKAHNDGVNCVRFLD
QHTFATCSDDNTVALWDARYLDSRLRTLAGHSNWVKNIEFSAKDQLLLSSGFDGAVYLWD
IKKCSESEPNHRKILYSNGLMRMKMSQGSERMVITTMNGYIMVIHDLDLHHLESDLYGFK
ANTYRLMQISGQMMPGAIEYSRLFQNKRNRIEFISDFPADNDAEIISSLEIHPQGWVAVT
RNVSADEGSEWCCVHDIHSPAQESMSSLEDEQSRLPLDPSSPRIRGNASSRRSSSSGLFR
LANYLASSNRLGSSNPPQRAGEGDDPNPESSANPMPVGEGTLAREITTDGDRPRIHIRSR
AVAMESLQILQTLARRYEMAGEEAESSGNGESEVGGESDVPHRRRRRTRLLAEGSEDASG
SSPNSNDLRAASSPSFEGANPMVIDVRSPYHHRVVRKVPLKEANIHLNLPRLTHYIQESH
TGQGFIKEISFSPDGRVFCSPFGFGVRILAFDPKCQDLSDTIHEVESNGPRELHEVGLIK
GHHSGSVLSCAFSPTQHILVTGCRNGQIAWHHPAL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagtctggtccgaatatttgtttgatcgctccttaggggcgaccagtcccgtc
cgtggcggggcttggagtcatggccaatgcctggcccagcttcaccaatcctggaccgga
ccaggctcggttggggctgcccaggacgctcgcccagccaccacctcttaccggggactg
gccttggagcctagtttagccggtgggatctataatctggactacaatcccgacgggtcg
gtggtggtggccgcttgcgagcaacgcaatattctcctctgtgatccccgtctccagcgg
gtggtgaatatcgtgtacaaagctcacaacgatggcgtcaactgtgtcagatttctggat
cagcatacgtttgccacatgttcggatgacaatactgtggcactgtgggacgcccgatat
ttagactctcgtctgcgtacattggccggtcattccaattgggtcaaaaacatcgaattc
tcggccaaagatcagctcttgcttagttccggctttgatggggccgtctatttgtgggat
atcaaaaagtgctcggaaagtgagcccaatcatcgcaaaatcctctacagtaacggtctc
atgcgaatgaaaatgtcgcaaggatcggagcgtatggttatcaccaccatgaacggttac
atcatggtcattcacgatctcgacctccatcacctcgaatccgatttgtacggttttaaa
gccaacacttatcgactgatgcaaatttcgggtcaaatgatgcctggcgccatagaatat
tcacgactgttccaaaacaagcgcaatcgaatcgagttcatcagtgatttcccggcggac
aatgatgctgaaatcatctccagccttgaaattcatcctcaaggttgggtagctgtcacg
agaaacgtatctgccgatgaagggtctgagtggtgttgtgtgcatgatattcattctccg
gcccaagagtccatgtccagtctggaagacgaacaaagtcgccttcctcttgatccctca
tcccctcgaattcgtggcaatgcatcatccagacgcagtagctcgtcgggtttatttcga
ttggccaactacctcgcatcttccaaccgcctaggatcatccaatccaccgcaaagagcg
ggtgaaggcgatgatcctaacccggaaagttcggccaatcccatgccggtgggtgaaggg
acgttggccagggaaatcaccacagatggcgatcgaccccgaatccatatccgatcgcga
gcagtggccatggaaagtcttcaaatattgcaaaccctggcacgtcgttatgaaatggcg
ggtgaagaagccgaatcctcgggtaatggcgaatcagaggtcggtggcgagtcggatgtc
cctcacagacgaagacgacgaacaagattgcttgccgaggggtctgaggatgcttctgga
tcgtcgccaaatagcaacgaccttcgtgctgcgagctcgccgtcttttgaaggtgccaac
ccgatggtgattgatgtcagatccccttaccatcaccgggtggtgaggaaagtacctttg
aaagaggctaatattcacctcaacctcccacgtctgacccattacattcaggaatcccac
actgggcaaggattcattaaagaaatctcattcagccccgacggacgagtgttctgctcc
ccttttggatttggggtgcgtatactggctttcgatccaaagtgtcaggatttgtcggat
actatccatgaagtggaaagtaatggacctcgagagctccacgaagtgggcttaatcaag
ggccatcatagtggctctgtgctctcctgtgccttctctccaactcaacacatactcgtc
actggttgtcgaaatggccaaattgcctggcatcaccctgcattatga
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