Tigriopus californicus (tidepool copepod): 131880388
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Entry
131880388 CDS
T09700
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
131880388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131880388
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131880388
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
131880388
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
131880388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
PKcGMP_CC
CcmH
Motif
Other DBs
NCBI-GeneID:
131880388
NCBI-ProteinID:
XP_059082997
LinkDB
All DBs
Position
5:14771039..14795828
Genome browser
AA seq
1786 aa
AA seq
DB search
MSQLPRPVSKIAKPVSHSHSCVGGHKDHDQPVEEDFKVGDKVWVGGTKAGKIAFLGETKF
APGEWAGVFLDDPVGKNDGSVAGVSYFKCEAMHGVFSRASKLSRQPLASGPPSCLTTPRK
VSKVGRASISPSESQANLKSETPSPTGSTISLASMGPLKVGDRVIVSNAITGTKAGTLRY
IGPTDFAAGEFGGVELDSAIGKNDGMVGDKRYFQCQPNFGIFAPMHKISKSPKNRMQRQP
SNLTPRKLNRERSDLSDISMASVVSTVSKAQGPVKKKSIASILAPERLKMSLKEKEDKID
NLLKERDLERAQIAKAASQTDEAEENLSRLREEYENYKFEQDERAAAYQSAVEQYEEKIR
RLKNKLEDEKKKSEDIEFKLEEETVMRTETEAGNSAELIEKIRSLEEQLAAEFNAKAEWS
GGKAEFETKIKDLQDRLGSEQKNRVDVQIDIESLKEELEAEKKKVDAKAKEVELFRVKLV
TSEEKLKETRVSLDVFKEESGNKVFETEEQVMLLKDEIEGLKTDLEEAQSNVEFERKNHA
TLQESLKSQSTTTIAQVNELEKNLAEKDNELIELKHKFASLESGNKTLLTTLDDKAKDIK
ERTLENQTLKEHVSKAEQEGASIRQELKAANLQLEDANNMVKIKESNLKEIQASKVETEK
QLANRSKEIDALKAQLDKSGSDTQIELQKKSEQVIELESKLAEIMKTVKVLEQDSAKISI
VEGEMRSVQKELEEANLAKAGLEKELMVWKDSSQTNTDEVKRLSGTVNSKDLELETLRGD
LAAMTGQLKDLKVAIDQTEAENAEKLDVAQRESKKAIHELEEKLRKTEAAKEKVEKSKEE
VIKDLNSKIRTTTTEHDQLAKNLREDIAKRVIEIESWQSKYSALQESLSSSTNESSKTLN
ELKQKVADLETNLNVKNRENTALQDELLKLTETAKQLEATKQELDIATKGKIAAEALNKD
FAQKLTTSQGKLSELAREKIHLEKSIQDMQNTSLDSNVQITSLNDEINAKKAELDQIKHV
QEEEKETYRKSLDEKAKEVTAKEIELQKVLESKASVEEEFKKEIKKLQEDIEGTKAAKAK
MASEAEEARAKATEAEEEAKIKISEITHRLEALGNDFKVKENALQSAESELKEEKVKRME
LEQALEKSKRSHEDELEELVDAINDLKMKEEELEATKEELELKSIELEKVNKEHAKARDQ
FQTELKFVQEQAQKELDVLTKQQEETKGQITYLKESMGGSKVEYDLQVDKLAKQLDTLKT
KHEEEIYKKDDLLKKMREDIANKEEELDFVKEELQAKTEELMDINTDLEVKEAGFNNSFK
ETEEQHKDEVEVLVSKVEEAKQEISELSETLAKTIADHDAKLDDMKIGRKTEVNTLQDQI
SERDRAILDLKATLEGMQTQVASLTSSQVDEAKIHEAKLGRLNVENEELRLKKRDLESTL
KTLQADFDQMNHLKEDLTIKVVEKEKQVKEFTSQVQTMRVTYEKTQKELSERVEKSSQDG
QALKEVEMALHEERLRVDELQIALAEAESERDCARSKSKDLQKISQHNNRLEEQNEALKR
DVADLKQKLAFSEQESQSERAELNEVVQQSKDLLREKLEEFKIQKQQYETLKLENQQLNS
YRRDLMIVEQEKRDLESQLVTLTYEARSGRRSPSPAKSFTSDMPEGELKGQVDFLNSVIV
DMQRKNDELKTKLELFESAGIIDAEAEAAFMFNGVSSRQVAPRLFCDICDEFDIHDTEDC
PTQAMDIPDEVVHTKSGGVRGQIREYCDICEVFGHSTENCSETETY
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattaccgcgaccggtctcgaaaattgccaagcccgtgtcccactcgcacagt
tgtgttggagggcacaaagaccatgatcaaccggttgaagaggacttcaaagtcggtgac
aaggtctgggttggtggaaccaaagcgggcaagattgcatttttgggcgagaccaaattt
gcccctggtgaatgggcgggtgtatttctggacgatcccgttggcaaaaacgatggctct
gtggcaggcgtgtcctatttcaagtgcgaggccatgcatggcgtcttctccagagcttcc
aagcttagccgtcaaccgctggccagtggaccgccctcttgtctgaccacgcctcgaaag
gtttcgaaagtgggacgagcttcaatttctccgtccgagagtcaagccaatctcaaatcc
gaaacgccttcacctaccggttcaaccatcagtttagcctcaatgggacccctgaaagtt
ggagatcgagtcattgtgagcaatgccatcactgggaccaaagcgggaactctccggtac
attggacccacggattttgcagccggagagtttggtggcgttgagctggactcggccatt
ggcaaaaatgatggcatggtgggagataaacgctactttcaatgtcaacccaactttggg
atatttgccccaatgcacaagatcagcaagtccccgaagaatcgaatgcaaaggcagcct
tccaatttgacgccgcggaaattgaaccgggagcgctcggacttgtcagacatttccatg
gccagtgtggtttcaaccgtttccaaggctcaagggcccgtgaagaaaaagtccatagcc
tctattttagcccccgaaagacttaagatgtccttgaaggagaaggaggacaagattgac
aatctgctgaaagagcgggatttggaacgagctcagattgcgaaggcggccagtcaaacc
gatgaagcggaagagaatctctcgaggcttcgggaagagtatgaaaactataagttcgag
caagatgagcgggctgcggcttaccaatctgccgtggagcaatacgaagagaagatccgg
aggttgaagaacaaacttgaggatgagaagaagaagagtgaggacatcgagttcaagttg
gaggaggagactgttatgcgaaccgagaccgaagctggaaattcggctgaacttattgag
aagattcggagcttggaagaacaacttgctgccgagtttaatgccaaggctgaatggagc
ggaggcaaggctgaattcgagaccaaaatcaaagatcttcaagatcgtcttggatccgag
caaaagaatcgcgtggacgtccaaattgacatcgagagtctcaaggaagagcttgaagca
gagaagaaaaaagttgacgccaaggctaaagaggttgaattgttcagggtcaaacttgtg
acctcggaagagaaactaaaggagacccgagtgagtttggatgtcttcaaagaggagtct
gggaataaggtgtttgaaaccgaagagcaagtgatgcttctgaaggacgagatcgaaggg
ttaaaaactgacttggaagaggctcaaagcaacgtggaattcgaacgaaagaatcatgcc
accttgcaagagagtctgaaatcccaaagtaccacaaccatagcccaagttaatgaactt
gagaagaacctcgcggagaaagataatgaactcattgagctcaaacacaagtttgcctcc
ttggaaagtggaaacaagacgcttctaacaactctagatgacaaagcaaaagacatcaaa
gagagaaccctggagaaccaaaccctgaaggagcacgtttccaaagctgaacaagaaggg
gcctcaattcggcaggagttgaaggctgccaaccttcaactggaagacgccaacaatatg
gtcaaaatcaaggagagcaatctcaaggaaattcaagcctcaaaggttgagacagagaaa
caattggccaatcgctccaaggaaattgacgcgctcaaagctcagttggacaagtcggga
tctgacactcaaattgaactccagaagaaatcggaacaagtcattgaactggaatcgaaa
ctagcggagataatgaaaaccgtaaaagtcctggaacaagattctgccaaaataagtatc
gttgaaggtgagatgaggagtgttcagaaggaactagaagaggccaatctggccaaggca
ggccttgaaaaagagttgatggtttggaaagactcgtcccaaacgaacacggatgaagtc
aagcgattgagtggaacagtcaattctaaggatcttgaattggaaacgcttcgtggagat
ctcgccgccatgactggccagctcaaggacttgaaagtagctattgatcagacggaggct
gaaaatgccgagaaattggatgttgcccaaagggaatccaagaaggcgatccatgagttg
gaagagaagttgagaaaaaccgaggctgccaaagagaaggtcgagaaatcaaaagaggag
gtcattaaagatttgaattccaagatcagaacaacaaccaccgagcatgatcaactcgcc
aagaatctgcgggaagacatcgccaagcgtgttattgagattgagagttggcaatccaag
tattcggctttacaagaaagcctgtcgtcttccaccaatgaatcttccaaaactttgaat
gaattaaagcagaaagttgcggatttggaaacgaaccttaacgtgaaaaatcgcgagaac
accgctctacaggatgaattgctcaagttaacggagacagccaagcaattggaagcaacg
aaacaggaacttgacattgcgaccaaaggaaaaatcgccgcggaagccttgaataaggac
ttcgctcagaaactgaccacgtctcaaggaaaattgagtgagcttgctcgagagaagatc
catttagagaaatccatccaggatatgcaaaacacatctctggattcgaatgttcagatc
acttccttgaacgatgagattaatgccaagaaggcggaactggaccaaatcaagcatgtc
caagaagaagaaaaagagacatatcgaaagagtttagatgaaaaagcgaaagaagtgacg
gcgaaagaaattgaactccagaaagttctggagtccaaggcatctgttgaagaagagttc
aagaaagaaattaagaaattgcaagaagacatagagggcacaaaagcggcaaaagcgaaa
atggcaagcgaagcggaagaagccagagcaaaagccacggaggctgaagaagaggcgaag
atcaagatcagcgaaatcacgcacagattggaagcccttggaaatgacttcaaagtgaaa
gaaaatgcactgcaaagcgcggaaagtgaattgaaggaagagaaagtcaaacggatggag
cttgagcaagccttagagaaatctaagcgaagccatgaagatgaacttgaagaactggtc
gatgccatcaatgatctgaagatgaaagaggaggaattagaggccacaaaagaagagcta
gaattgaagtccattgagctggagaaagtcaacaaggagcatgctaaagctagggatcaa
ttccagaccgagctcaagtttgttcaagaacaagctcaaaaagaattagacgttttgacc
aagcaacaggaggagaccaaaggacagatcacttacctcaaagaatccatgggtggaagc
aaagtagagtatgaccttcaagtagacaagctagccaagcaattggacaccctaaagacg
aagcatgaggaagaaatctataagaaagatgaccttctgaagaaaatgagagaagatatt
gccaataaggaagaggaactcgattttgtcaaggaagagctacaggccaaaactgaggaa
ctcatggatatcaacaccgacttggaggtcaaagaggcgggcttcaacaacagtttcaaa
gaaaccgaagaacaacacaaggacgaggtcgaagttttggtttcgaaagtggaggaagcc
aagcaagaaatctcggaattgtcggaaactttggccaaaacaattgctgatcatgatgcc
aagttggatgatatgaagattggacggaaaaccgaggtcaacactctgcaagaccaaata
tcagaacgggatcgggcgattctggacctcaaagccacgctagaggggatgcaaacccaa
gtcgcaagtctcacatcctctcaagtggatgaggcaaagattcatgaggccaaacttggc
agactgaatgttgagaatgaagaactccggttgaagaaacgagatctggagagcactctt
aagacccttcaagccgatttcgatcaaatgaatcatctaaaggaggacctcaccatcaag
gttgttgagaaggaaaagcaggtcaaagaatttacatcccaagttcagaccatgagagtg
acttatgagaagacacagaaagagctgagtgagagggtggaaaaatcctctcaggacggc
caagccctcaaggaagttgaaatggcacttcatgaggaaaggctccgggtagacgagctc
caaattgccctggccgaggccgaatcggagcgagattgtgccaggtcaaagtccaaggat
ttacagaagatctctcaacacaacaatcgtttggaagaacagaatgaagccctcaagaga
gatgttgcggacctcaagcagaaactagccttctccgaacaagagtcacaatccgaaaga
gctgagctcaatgaagtggttcaacaaagtaaggacctactcagagagaaactcgaggaa
ttcaagatccagaagcagcaatatgagaccctgaagctcgagaatcaacaactcaattca
tatcggcgagatctgatgatcgtggaacaagaaaagcgggacctagagtcccaattggtg
accctcacctatgaagcccgatctgggcggagatctccttcaccggccaagagcttcacg
tccgatatgcctgaaggcgagctcaaaggccaagtggactttctcaactcggtcattgtg
gatatgcagaggaagaatgacgagctcaagaccaaattggaactgtttgagtcagctggg
atcattgatgccgaggccgaggcagctttcatgttcaatggcgtgagctcaaggcaagtg
gcaccgaggttgttttgtgatatctgtgatgagtttgatatccacgacacagaggattgc
ccaacccaggccatggacattccggacgaggtggtccacaccaaatccggtggggtgcga
gggcaaatccgggaatattgtgacatttgtgaagtgtttggccattccacggagaattgt
agtgagactgagacgtactaa
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