Tigriopus californicus (tidepool copepod): 131880390
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Entry
131880390 CDS
T09700
Name
(RefSeq) long-chain fatty acid transport protein 4-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131880390
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131880390
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131880390
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
131880390
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131880390
NCBI-ProteinID:
XP_059083001
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Position
5:14817279..14821303
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AA seq
642 aa
AA seq
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MSWPSIDPKIYQYGLWTGIGLGALVEYPNFSLAFNTLGRDLSSFWKLGRVLSKVKSAQRN
NVTVPDLFAQSAQSYPDKAMVVQVETGETWTFKEMDEYSNQVANFLLKQGFRKGDVIALF
MVNQPKFIGIMLGMAKVGVTGALINTNLNAEPLEESVRVAKSKACIFNAELGEGLKSLAT
SGKFGPDFRFFVSDLSRHFNEFGEDFDLGLSDSPKTPLSVSETKNLHWTDNLIYIYTSGT
TGLPKPAYGDHSRYILGSSLGIHGIGISSSDRIYCTLPLYHSSGQWMALGVTILSGATLL
LRSKFSATHFWKDCVQYEATCAQYIGEMCRFLLGTPKCDEESRHQVKFMFGVGLGRQIWP
EFVKRFKIPKIVEMYGSTEGTVGVMNIRNKEGSIGFISQLFDVMPFGLIKVDKTGEPIRS
SKTGLCIRCGPHEAGELVGKVRDDDRGGPDKFKAYVGKTEETSKKMLKNIWKKGDVGFRT
GDILVMDDHGWLFFKDRTGDTFRWRGENVSTAEVESIISKLIGHQEVAVYGVEIPGTEGK
AGMAAIHDPYGTVELKPLEEAMRKRLPKYAQPLFIRILKDLDLTGTYKLMKKGLKSEGYD
VTQIKDAIYFRNSSKFSYKLLDTDTWLQLQTGALASKLYQPE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggccttcaattgaccccaagatctaccagtatggtttgtggacaggcattggt
ctcggagccttagtggagtatcccaacttcagcttggccttcaataccttgggcagggat
ttgagctcattttggaaattaggcagggtcttgagcaaagtaaaatcagctcaacgaaac
aatgtcaccgttccggatttgtttgcccaaagtgctcaaagctatccagataaggcaatg
gttgttcaagtggaaacaggagagacttggacattcaaagaaatggacgagtactccaat
caggtggctaattttctcttaaaacaaggctttcgcaagggagacgtgatcgcgttgttt
atggtgaatcagcccaaattcattggaattatgctgggcatggctaaagttggcgtcact
ggtgctcttatcaataccaatctcaatgcagagccgttggaggagagtgtcagggtggct
aaatctaaggcctgcatattcaatgccgagttgggagaaggattaaagagcctagccaca
agtggaaaatttggacccgattttcgatttttcgtgtctgacctctccagacattttaac
gagttcggtgaagacttcgacttgggcctaagtgacagccccaaaacgcccttgagtgtg
tccgagacaaaaaacctccattggactgacaacttgatttatatttatacctctggaacc
accgggttaccaaaacccgcttatggcgaccattctagatatattttgggctcctcgctt
ggtatccatggaatcggaataagttcttcggatcgcatttactgcacccttcctctgtat
cattcttctggccaatggatggcccttggggtcactatcttgtcgggggcgactctactt
ttgaggagtaaattctctgccacacatttttggaaagattgcgtccaatacgaagccact
tgtgcccaatatattggagagatgtgccgctttctcctagggactccaaaatgcgacgaa
gaaagtcgacatcaagtcaagtttatgtttggagttggtcttgggcgacaaatctggccc
gagttcgtcaaacggtttaagatcccaaagattgtggaaatgtatggatccacagaggga
acagtgggcgtgatgaacattagaaataaggaaggttcaattggatttatttcccaactt
tttgatgtgatgccattcggcctcataaaagtcgacaaaacaggggagcccattcgtagc
tccaaaacaggactatgtatccgctgtggacctcatgaagctggcgagttggtggggaaa
gtgagagatgacgatcggggtggtcctgacaagttcaaagcgtatgttggaaaaaccgag
gaaacgtcaaaaaagatgctcaaaaatatttggaagaaaggggatgttggattccgaacc
ggtgatattttggtgatggacgatcatggatggcttttcttcaaggatcgaactggggac
actttccgttggcgtggcgaaaatgtgtctacggcggaggtggaatcaatcattagtaaa
ctaattggccaccaagaagtggcagtatatggtgttgaaattcccggcactgaaggcaaa
gctggcatggctgcaattcatgatccttatggtactgtggaattaaaacctttggaggag
gccatgcggaagaggttgcccaaatatgcgcagcctcttttcattcgaatactcaaggac
ctcgacttgaccggtacttacaaattgatgaagaaaggcctaaaatccgaaggctacgat
gtgactcaaatcaaggacgccatttatttccggaattcgagtaaatttagttataaatta
ttggatacggacacttggcttcaattgcaaacaggagccctcgcgtcaaaactctatcaa
cctgaatga
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