Tigriopus californicus (tidepool copepod): 131880425
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Entry
131880425 CDS
T09700
Name
(RefSeq) pickpocket protein 28-like isoform X1
KO
K03440
acid-sensing ion channel, other
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880425
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
131880425
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Gene cluster
GFIT
Motif
Pfam:
ASC
DUF4293
Motif
Other DBs
NCBI-GeneID:
131880425
NCBI-ProteinID:
XP_059083048
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Position
5:complement(4949262..4958570)
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AA seq
605 aa
AA seq
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MSVPRAAMYQAPKKDLLLKRQAKEYCGAASIHGLTYIAEEGRPIWENLLWVFLCIASAVV
CVLLCLPIWNKWKDSPTYTTVSSTNFPVWEIDFPAFTVCSNEKIILKNLEHIYEKKKTDD
KTASGMLDILTKYVKFVEDPSVFQDFYSNQTGLFKNNTDPINGLLRWSMHSCEDMLLYCE
WQGIPKKCDTLFKVSKSDNGFCCSFNIVTTREQFETADTVEGSSNDSFTDYYYEIQYFDE
TNSTGNTSESGSGGGVQKRSVTEAPKSEDTTTAKSSQNVLKLQKTNSASTLLGLTVILKP
SSLTPQTGSELNVNIHDYDGYKFLVHDPREFPEVTGKGLALLTGNVAYVGVSASYTNSTP
AVRKMAIKGRKCIQGGSDLQTLEITEGVKMEVFQNYTRANCLLECRAHLMQKTCQCLPYY
FPDFTKVWNKNTECDLEGLECLAKEAVRLNALNVGDKKPDRDSGLLDGASCNCPIQCEET
IYNTELSQVKAKQNAPIFQRYLDSCDLESEKDSNAVPSPNCEIRNDAKNNQESLTIAYVY
FKELGVLKYTRDELYSTIDVIAAFGGVIGLCLGFSFLSGAEFLYWFTLRMGTDVSRKKRS
APMTD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgccaagggccgctatgtatcaagctccgaagaaagacctcttgttgaaaaga
caggccaaagagtattgtggcgctgcatccatccatggacttacctacattgccgaggag
ggacgacccatttgggaaaatctattatgggtgtttctatgcattgctagtgcagtggtt
tgcgtcttgctttgcctgcccatttggaataagtggaaggatagtcccacatataccacg
gtctcgagtacaaattttccagtttgggagattgatttcccggccttcacagtgtgctcc
aatgagaagatcatcctaaagaacttggaacatatttatgaaaagaaaaaaactgatgat
aaaaccgcttcggggatgcttgatatcctcaccaagtatgtcaaatttgtcgaggatccg
tcggttttccaagacttttactcgaaccaaaccgggcttttcaaaaacaacacggatccc
atcaatggccttttgagatggagcatgcactcttgcgaagatatgttactgtattgtgaa
tggcaaggtattcccaaaaagtgtgacaccttattcaaagtgagcaagtcggataacgga
ttctgttgctctttcaacattgtgacaactcgcgaacaattcgagacagcagacaccgtc
gaagggtcttcaaatgactccttcaccgactattattacgaaatacaatacttcgatgag
accaacagtacggggaatactagtgaatcaggatctggtggtggagttcagaaaagaagc
gtgaccgaggctcccaagagtgaggacacaaccaccgctaaatcgtcccaaaatgtattg
aaacttcagaaaacgaatagcgccagcactcttttgggactaacggtcatcctcaagccg
tctagtttgacgcctcagacgggctccgagctaaacgttaatatacacgattatgatggg
tacaagtttttggttcatgatcccagagagtttcccgaggttacgggcaagggcttggct
ttactgactgggaacgtggcctacgtgggggtttcagcatcctacactaacagtacccca
gctgttcggaagatggcaatcaaaggacggaaatgcattcagggcggatcggacctacaa
accttggaaatcacggagggggtgaagatggaagtgttccaaaactacacccgagccaat
tgcttattggaatgtcgtgcacatttgatgcaaaaaacatgtcaatgtttgccctactat
ttcccagacttcactaaagtttggaacaaaaatacagaatgtgacctggagggattggag
tgcctggccaaagaagccgtccgattgaatgcactcaacgtcggagataagaaacccgat
cgggattcgggtcttttagatggggcatcttgcaattgtccaatccaatgtgaagagacc
atttacaatacggaattgtcccaagtcaaggccaaacaaaatgcacccatattccagcga
tatctggactcgtgcgacctcgagtcggaaaaagattcgaatgcagtgccatcacccaat
tgtgagattcgaaacgatgccaaaaacaatcaagaatcgttgaccatagcatatgtctat
ttcaaggagttgggggtcttgaaatacacaagggatgagttgtattccaccatcgacgtg
atagctgcatttgggggtgtgattggattatgccttggattcagttttctgagtggagcc
gaattcctatactggtttacattaaggatgggaacagatgtctcgaggaaaaaacggagt
gccccaatgacggattaa
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