Tigriopus californicus (tidepool copepod): 131880503
Help
Entry
131880503 CDS
T09700
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880503
Ion channels [BR:
tcf04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
131880503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA_2
Big_13
TMEM154
DNER_C
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
131880503
NCBI-ProteinID:
XP_059083143
LinkDB
All DBs
Position
5:11055523..11062068
Genome browser
AA seq
1230 aa
AA seq
DB search
MAFVCKVILALVLGALCSLGQSSMIQVQNGIYNRITVNVNDVVPKHLCNKVLDQLEALLT
ETSASLHELTESNLLFGSISVILPKSWESLDCLVGRNSLHHDLESHVSQQADIQLAEQHP
IFGANPWTTQFGPCGVSGRGIDLPYPSLTRNHTVDDATSRAMLKAWIQYRWGVFEEQGFE
GDTRYPSTYMEGEMELENRGCDNKADQLICPLDKYDHDVTTKQNILCNGKSIREVILASQ
DLNEQANEQPRETAKTIFVDNTGEKRPTLDNDQVTTIDIQDDVKPRQPTKENNSTQEDNK
YFLSQDDGEREEQEEHEEMVKGGKQPFRAPIFNYVLPRPELFVLVLDRSSAASSGKILVG
QKQQDEEFEETQSKWETLQQSLFQLISRLPVGAELSIITYGQEAQVNLPPTLITDTNKEG
LHGRIPRRPLSHDTTSCLDCALKTAFKVMQLGSKYEGRMIVASMSLSQISAENLETIEQF
AVPVYSVSLSGLQGKLEVDQLTKFGDKFVVTSPLSNQPEFLTRLSRTFTSVVRAASDVSI
VSFHQDHRVPNIDNIITGNFVVEEHLRKNLRIVVTADDERDIEVFEVLSPTGRKHSFPTY
EHSMAYFNLAGLNEPGIWSFSIRLYQTLVSHYPVYIEVLGEPNDDNAITLETWVHQRQDG
ANPEEVYVYAQVKQGDLPVLDAEVVASILRPGDKDFQPVLLQLRDMGTGYPDITQGDGIY
SAYFTDFSPQSGYYQLSVSASDNSGNARTPKLSASIDADTNICCGSALPFSYTVPTGPFQ
RFAVGSSFLIEQTSNFYIRQGSRLVNDIFPPNRITDFWVDNYLDESLFVTLKWTAPGGDY
DQGKAFRYEIRCYTSREALRDSNFADMSIPVHASLIPQPEENGSEQRCTVGVPWPNEVFY
YAIVAFDEAGNRGKISNTISVFIKEDPSTLPPLHNLIESNEVDHLSQEPLQSFTENNSTQ
IIYIVVGSVSFVLLILIILCIIAIRKHYRIVKGFVSNSNESSRTRSIEDGDEDSSLAGTL
KKIIAERSGKHFVEAKLWSSAASSPTSDYSSQKSPLPSISETLSWKYRNGLQKATSQELP
GVHRIHDQKFSSIHTKIEAGDPGDKEISAKSDCGSRNGTDCSTLLYESSDNGSSSLDMSP
KKDVDSLVVSQRHSFGQKACQLPGPPPRVSVMEDYSVYRDLSNLSNNQNDYFSVSQLPAE
LQNGGHIIAVPPYYDVNALEAQRKRHESLV
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtttgcaaagtgatcttggccctagtattgggagcactgtgttcccttgga
caaagcagcatgatccaagtgcaaaatggaatctataatcgaatcacagtgaacgtcaac
gacgtggttcccaaacatttgtgcaataaggtgctcgatcagttagaggcacttttgacc
gagacctccgccagccttcatgagttaactgaaagcaacttgctcttcgggtccatctcc
gtgattctaccaaagtcgtgggagtccttggattgcttagtgggaagaaactcccttcac
cacgacttggaatctcacgtatctcaacaagcggacattcagctcgccgagcaacaccct
atttttggagccaatccatggaccacccagttcggtccatgcggcgtgtccggtcgaggc
atcgatctgccgtacccaagcctcacccgaaaccatactgtggatgatgctacatcaagg
gccatgctcaaagcttggatccaatatcggtggggagtgtttgaagagcagggctttgag
ggcgatacacgctatccctcgacctacatggaaggtgaaatggagcttgaaaaccgggga
tgcgacaacaaggctgatcagttgatttgtccgcttgacaagtatgaccacgacgtgaca
accaagcaaaacattctttgtaacggcaagagcattcgtgaagtcatccttgcttcccaa
gatctgaatgagcaagccaatgaacagccgcgggagaccgccaagacgatctttgttgac
aataccggagagaagcggccaaccctcgacaacgatcaagtcacaaccatcgatattcaa
gacgacgtgaagccccgacaaccaaccaaggaaaacaattcgactcaagaggacaacaag
tatttcctgtcccaagatgatggggagcgggaggagcaggaggagcatgaggaaatggtg
aagggtggaaagcaaccattccgagccccgattttcaactacgtacttccacgacctgag
ttgtttgttcttgtgctcgatcgctcttcggcggcttcatccggcaaaatcctggtgggt
cagaagcaacaggacgaagaatttgaagagactcagagcaagtgggagactttgcaacag
tcgcttttccagttgatctccaggcttccggttggcgccgagttgagtatcatcacgtat
gggcaggaggctcaggtgaaccttcccccaactctaattacggacacgaataaagaggga
ttacatggtcgtattcctagaagacccctcagccatgacaccacctcctgtctggactgc
gctctcaagactgccttcaaagtcatgcaattggggagcaaatatgagggtcgaatgatt
gtggcttccatgtcactgtctcagatttccgccgaaaacctcgagaccatcgaacagttt
gctgtccccgtgtacagtgtgtcgctctcgggtcttcagggcaagctcgaagtggaccaa
ctgaccaagttcggcgataagttcgtggtgacatcccccttgtcaaatcaacccgaattc
ctcactcgtctctctcggacttttaccagcgtggtgagagccgcctcggatgtgagcatt
gtctcctttcaccaagatcaccgagtgcccaacatcgataacatcatcaccggtaatttt
gtggtcgaggaacatttgcgcaagaatctcaggattgttgtcacggccgatgatgagcgt
gatatcgaagtctttgaggtgcttagtcccacgggccgtaagcattcctttccgacctac
gagcacagtatggcttacttcaatttggcgggcctcaacgagccgggcatttggagcttc
agcattcgtttgtaccaaacgttggtcagccactacccggtttacattgaagtcttggga
gagcccaacgatgacaacgccatcactttggagacatgggttcaccagaggcaagacgga
gccaatcccgaagaggtctatgtctacgcccaagtgaaacaaggtgacttgccggttttg
gacgcggaagttgtcgcctcaattcttcgaccgggtgacaaagactttcaacccgttcta
ctccaactgcgagacatgggcactggctatcccgatatcacccaaggcgatggcatctat
tcggcgtacttcaccgacttctcccctcaatccggctattatcagctctctgtgagtgcc
agtgataactcgggcaatgcccgaacgccaaaactaagtgcatccatcgatgctgacacc
aatatttgctgtggcagtgcacttcctttctcctacaccgtgcccactggcccttttcag
cgtttcgctgtgggatcctctttcttgatcgagcaaacatccaacttctacatccgccag
ggatcccgtctcgtcaacgatatctttccaccgaatcgaatcacagatttttgggtcgac
aactacttggacgagtcgctctttgtgaccctcaagtggaccgccccagggggagactat
gatcagggcaaggcctttcgatacgagatacgatgctacaccagtcgtgaggccttgcga
gactctaattttgcggatatgagcatccccgtgcacgccagtctcattcctcaacccgag
gagaatgggtcggagcagcgctgcacagtcggggtgccatggcccaacgaggtgttctac
tatgccattgttgccttcgacgaagccggaaatcgggggaaaatctccaacactatttct
gttttcatcaaagaagacccatccacgcttcctcctcttcacaacctgattgaatccaac
gaggtcgaccatctcagccaggaaccgttacaatcgttcaccgaaaataactcgacccaa
atcatctacattgtcgtcgggagcgtgtcgtttgtgctgctcatcctgattatcctatgc
attattgccatcaggaagcattaccgcatcgtcaagggattcgtgagcaattccaacgag
agttctaggacgcgaagtatcgaggatggcgatgaagactcaagcttggctggaactctg
aagaagatcatcgccgagcgcagtggcaagcatttcgtggaggctaaactttggtcaagt
gcagcatcctccccaaccagtgactactcgagtcaaaagtctccacttccttccatctct
gagacgctttcgtggaagtatcgcaacggcctacagaaagccacttcacaagagctccct
ggagtgcacagaattcatgatcaaaagttcagcagcatccacaccaagatcgaagccggc
gaccccggtgataaggagattagtgccaagagcgattgtggctctcgaaacggcacggat
tgctcgacattgctgtacgaatcttcggataatggctcctcatctctggatatgagtccc
aagaaagatgtcgactcattggttgtgtctcagcggcattcctttggacaaaaagcgtgt
caattgcccggtccaccgcctcgagtctcggtcatggaggattacagtgtgtacagggat
ctgagcaatctgagtaataaccaaaacgattatttcagtgtcagccaattgcccgctgag
ctgcagaatggtggccatatcattgctgtgcctccctactacgatgtcaatgctttggag
gcccagcgaaagcgacacgagtcccttgtttga
DBGET
integrated database retrieval system
