Tigriopus californicus (tidepool copepod): 131880533
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Entry
131880533 CDS
T09700
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 homolog
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131880533
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131880533
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131880533
04121 Ubiquitin system [BR:
tcf04121
]
131880533
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131880533
Peptidases and inhibitors [BR:
tcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131880533
Membrane trafficking [BR:
tcf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
131880533
Ubiquitin system [BR:
tcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131880533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
RLMM_N
Motif
Other DBs
NCBI-GeneID:
131880533
NCBI-ProteinID:
XP_059083175
LinkDB
All DBs
Position
5:7716511..7718076
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AA seq
446 aa
AA seq
DB search
MDHPPWPLFALAGAAALALGTCYVAFGPSTASKRPRRPHDPPGLSNSGQSCFVNAILQAL
ASCGTFIQWLETRIQDHCPQDQSVREQLGHTLAILNNRGQIGRVQVWSAEPLMTAIRMHG
WVIDTQEQDAHEMLHILLTSLEEELLRLEMARTNTAGIGDIVEATLPESNPVSQPDFQPG
HRRRSSGVFLKSGEEITLPHVEGQTNTLKRRKTSTPFNGTLTNKVTFTDGRSKSPVSSLG
FNNITLCLPKSGHILNGVVSLETLLQMYISRETVEGATSQSGHKTNPALAKQLAFGKLPP
CLCLHIQRTAFSANTPSKRWEHVAFPELLDMKRYVYLSQMKKDQALKKSVSNQEVMSLLS
DMSSSSSPSDLYLLRSVVVHLGQVSSGHYVTYRRGPLNTPSGSKWFCISDASVEPVPLST
VLKANAFMLFYEKLQPTAITPTTYFC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggatcacccaccctggccgttgttcgccttggccggcgccgcggccttggctctgggc
acgtgttatgtggccttcgggccctcgaccgcatccaagcggcctcgccgaccccacgac
ccaccgggtctgagtaactccggacaaagttgcttcgtcaatgccattctccaagccttg
gcctcatgtggcacgttcatccaatggctggaaacgcggattcaggatcattgcccgcaa
gatcagtcggtccgggagcaactcgggcacaccttggccattttgaacaatcgcggtcaa
atagggcgggtccaagtttggtccgccgaaccgctcatgacggccatcagaatgcacggc
tgggtgattgatacccaagagcaagatgctcatgagatgttgcacattttactcacttcg
ctggaagaagagcttcttcgtctagaaatggcccgcactaacaccgctggcatcggtgat
atcgtggaggcgaccttgcccgaatccaaccccgtgtctcagcccgattttcaacccggt
catcggcgacgatcttcgggcgtgtttctgaaatccggcgaggagattaccttgccccat
gtcgagggtcaaactaatacgctcaaacgacgcaaaaccagtacaccttttaatgggaca
ctcaccaataaagtgacctttaccgatggccgctccaagtcacctgtttcttccttaggc
tttaacaatataacgctctgtctacccaaaagcggtcacatcttgaatggagtcgtatct
ctggagaccttacttcaaatgtatatttctcgtgagaccgtggagggtgccacctctcaa
tccgggcacaaaaccaatccggctctcgccaagcaattagctttcggcaaattaccccct
tgcttgtgtttgcacattcaacgcacggcgttttctgccaatacgcccagtaaacggtgg
gaacatgtcgctttcccggagctcctcgatatgaaacgatacgtctatttgagtcagatg
aagaaagatcaagccttgaagaagtcagtctcaaaccaggaagtgatgtcgctcctcagt
gatatgagttcgagcagctcgcccagtgatttatatctccttcgatcggtggtggtgcat
ctaggtcaggtctcttcaggccactatgtgacctaccgtcgaggcccattgaatactccg
tcaggctccaaatggttttgcatctcagatgctagcgttgagccggtgcctttgtccacc
gttttgaaagcgaatgccttcatgctgttctatgaaaaacttcaacccaccgccatcacc
ccaaccacttatttctgttaa
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