Tigriopus californicus (tidepool copepod): 131880573
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Entry
131880573 CDS
T09700
Name
(RefSeq) semaphorin-1A-like isoform X1
KO
K06842
semaphorin 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
131880573
NCBI-ProteinID:
XP_059083222
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Position
5:12975421..12980763
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AA seq
921 aa
AA seq
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MDMLQKDTLSMKGYLLWLCFLAVSWCPTSLAIQWQDNLRPKLFCSMTDRDYTAFLGNVTS
KNHFSQLFYTSTTVDKLSPPLLLIGARNIMYKVSADELRLKQTLVWHASDFDKESCSVKG
KNKETCQNYIVVIQQYSTDPSRYLICGTNAFKPMCREYIDERGSYVKRSEFSGLGLAPFD
PAHNSTAVLVGGELYSGTVADFTGVDPIIFREPLRTQQYDSVQLNSPDFVGSFEHQDFVY
FFFREAAVEYINCGKAVFSRVARVCKGDQGGPNKAKNSWTSYLKTRLNCSVPGHYPFYFD
EIQGISELVQGQYGPESDGRDSVIYATFTTPSNSIGASAVCAFRLREISDAFSGRFKEQR
SSGENWLAVDDNKVPSPRPGICNNDTKSLPDQNLNFIKTHSLMDEPVQPFFGSPIVIRTG
MVSRFTVIAIDPQIKTTDGRAFDVIFVGTTNGRVLKVINAQSAFSRTKVETIIIEELQVF
SNTIFIKDVKVMGHGTEGQQSLGSLAVMSETEVRAFPVQRCDRASTCVECVALQDPYCAW
EIRSSRCSSGDWTKNMASSFIQSITTGIHPHCPAGDAASASAQAVSQVYSYEKFLGGLQL
GQVVNIIDESRLENEIGAGTQGGSGIITSDVGAGSGNGVQVVEPSQVLFSLETLIITVSA
GAVAALVVGFVTGYCCGRKCRKEEDGHMPYPDTEYEYFEQRGGLARPILMGPAGAPLLPA
QSAKLHDGRHEEVTYAEPDLVSGPLRQMPPPTANQLAMMAPPPPGPPTMMPGTNRYQPSI
GGGPPSQGVLGGHYSSSLLNPQNKFNTIHAGGKRPLPSINQYESAAEAKLGSGKDPAYYA
RGRDNLNSYHMSTLGRSTSMRNKDPLNTHRSMGDHSNASSSEGSSGGGGNGLGTGGGGGK
GSQVVDSAYGTTRSVKSKVYL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctacagaaagatacgttgtcaatgaagggatacttgctgtggttgtgtttt
ttggcagtaagctggtgtcccacctccttggccatacaatggcaagacaaccttcggccc
aaattgttctgctcaatgaccgacagagactacacagccttcttgggaaatgtgacatcc
aagaaccacttttcgcaactgttttacacctctaccaccgtggacaagctctcacccccg
ttacttcttattggagctagaaacattatgtataaagttagtgcagatgagcttcgcctt
aaacagactctagtttggcacgcttcagacttcgataaagaatcttgctcagtcaagggc
aaaaacaaagaaacttgccaaaattatattgtcgtgattcaacaatacagcacggatccc
tcgagatatttgatttgtgggactaatgccttcaagccgatgtgtcgagaatacatcgat
gagcgagggtcgtacgtgaagcggagtgaattctcaggcttgggactggccccctttgat
cccgctcataactccactgcggttctggtgggaggagaactttactctggaaccgttgcc
gatttcaccggagtggatcctataatatttcgtgaacctcttcgaacccagcagtatgac
tcggttcagctcaactctcctgacttcgtcggttcttttgaacatcaggatttcgtatac
tttttcttccgggaagcagctgttgagtacataaactgcgggaaagcagtgttctctcga
gttgcccgcgtatgcaaaggtgatcaaggtggaccgaacaaggccaaaaattcctggacc
tcctacctcaaaacaaggctcaattgttccgtgcctggacactatcctttctatttcgac
gaaatccaaggcatatccgaactcgttcaaggtcaatacggccctgaatccgatggccga
gactcggttatctatgctacattcaccactccatcaaattcaatcggagcatccgccgtg
tgcgcatttagactccgggaaataagtgatgcatttagcgggcgttttaaagaacaaaga
tcatcaggcgagaactggctcgccgttgacgataacaaggttccgtcaccgcgaccagga
atttgtaacaacgacacaaaaagtcttccagatcagaacttgaacttcatcaaaactcac
tcattaatggatgagccagttcaaccattttttggatctcccattgtcattaggactgga
atggtgtctagattcactgtgattgcaattgatccccaaatcaagaccacagatggacga
gcctttgacgtcatttttgtcggtacaacgaacggacgagttttgaaagtgataaatgcc
caatctgctttttcccggaccaaagtggaaacaatcatcatcgaggaattgcaagttttt
tccaatactatctttatcaaggatgtgaaagtgatgggacatggcaccgaaggccaacaa
agtctaggctcacttgcagttatgtctgagactgaagtgcgagctttcccggtccaacgt
tgcgatcgggcctctacctgtgttgaatgtgtggccctccaggatccgtattgcgcttgg
gaaattaggtcgtcgagatgtagttcgggggattggacgaaaaatatggctagcagtttc
atccaatcgatcaccacgggaattcatccacattgtcccgctggcgatgcggcaagtgct
tcggcacaagccgtgagtcaagtgtattcttatgagaaattcctcggaggactgcaacta
gggcaagtcgtaaatattattgatgaaagccgattggaaaacgaaattggagctggaacc
cagggagggagcgggataataacctctgatgtgggtgcagggtctggcaatggcgttcag
gttgtggaaccatcccaagttcttttttctttggaaactctgatcattactgtaagtgcc
ggcgctgtggctgccttagtggttgggtttgtcacgggctattgctgtggccgaaagtgt
cgcaaggaagaagatgggcacatgccctatcctgatacagagtacgagtactttgaacaa
agaggcggactagcacggcccattttaatgggtccagctggtgctcctttattacccgca
caatctgctaagcttcatgatggacggcacgaagaggtcacctatgctgaacccgattta
gtctcgggacctctcagacagatgccacctcccaccgcaaatcagttggctatgatggcc
cctccacctcctggtcctcccacgatgatgccagggaccaaccgatatcagccttccata
ggaggtggtccacctagtcaaggtgtgttgggtggacattactcaagttccttgctgaat
cctcagaacaagttcaatactattcacgcaggtgggaaacgccccttgcccagcataaat
caatatgaaagcgccgctgaggccaagctggggagtggtaaagaccctgcctactacgcc
aggggtcgcgacaatctcaactcgtatcatatgtcaaccttgggtcgaagcacctccatg
cgcaacaaggaccccctgaacacccacaggtccatgggtgaccattccaatgcaagcagc
tctgaaggctcttctggtgggggaggtaatggcctgggtactggagggggaggagggaaa
gggtcccaagtggtagacagtgcctatggaaccacaaggtctgtgaagagcaaagtgtat
ttgtaa
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