Tigriopus californicus (tidepool copepod): 131880593
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Entry
131880593 CDS
T09700
Name
(RefSeq) glutamate-gated chloride channel alpha-like
KO
K05273
glutamate receptor, anionic
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880593
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Anionic glutamate
131880593
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Flu_M2
60KD_IMP
Motif
Other DBs
NCBI-GeneID:
131880593
NCBI-ProteinID:
XP_059083243
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Position
5:5555610..5557304
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AA seq
409 aa
AA seq
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MKAVRLTALFTLLLGTPQVLGMECLPNSSPLQPFCLPSNYSKEDRPCEEKFQIFTAFIID
DVSVVDDISCAVTMALIMRFSWIEPRMRLNEHVFLSKLRGAETTLEIAYENRNKIWIPDL
YISNLRDKSNTGFLDHPGIKIDIDTNKTIIYSHYAEVTFLCPMIFDLFPFDIHHCDFKVQ
SLEHTDASISFEYENNTTGILWKTQTILEHAVSFTVLEDHRRFTIFKDLNGISEQYSAIG
VTVTMSRKYLPFLIDYFLPAGLFVLVSWVSFLIPPAIVPGRMALLITLFLMLVNISTSAT
THSPKSDQINALQIWILSCILFVFLALMEYALILYWKHLRGVSSRMISSSDTLSVTPIKD
DDSTCWSNQSTDELERRISHVDFICLILFPMAFLSFNCIYWLLLFRSSK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagtaaggctaactgcattattcactctattattaggaactccccaggtgttg
ggtatggagtgtctcccgaattcatcaccattgcaaccattttgtttaccctcaaattat
tccaaagaagaccgaccgtgtgaagaaaaatttcaaattttcaccgcattcatcatcgat
gatgtgagtgtagtggacgacatttcgtgtgcagtgaccatggcgctcatcatgagattc
agttggattgagcctcgaatgcggctaaacgaacacgtctttttgagcaaattaagggga
gcggaaacaacgctggagattgcttatgagaatcggaacaagatctggattccagacctg
tatatatcgaatttgagggataaatccaacacaggatttcttgaccatcccggcatcaag
attgacattgatacgaacaaaactatcatttattcccactacgccgaagttacctttctt
tgccctatgatttttgatctgttcccctttgacattcaccattgtgatttcaaagttcaa
agtttggagcacacagatgcttcgatatcatttgaatatgagaataataccacgggaatc
ctctggaagacccaaaccattctggagcatgcagtatcctttacggtcctagaggatcat
aggcgattcaccatctttaaagatctcaatgggatctcagaacagtactcagctattggt
gtcaccgtcacaatgagtcgcaaatatctaccctttctcatcgactactttcttcccgcc
gggctcttcgtcttggtctcttgggtgagctttctcataccccccgcaatcgtccctggg
agaatggcccttctcataaccctgttcttgatgttggtcaacatctcaaccagtgcaacc
actcactcccccaagagtgatcagatcaacgctcttcaaatatggatcttgagctgtatc
ctatttgtcttcttggccttgatggaatacgccttgattttgtattggaagcatttgcga
ggagtcagttcgcggatgatatcatcctccgacaccttgtcagtcacgcccatcaaggac
gatgattcgacttgttggtccaatcagtccacggatgaattggagaggcggatttctcat
gtcgatttcatttgtttaattctgttccccatggctttcctaagcttcaattgtatctac
tggttgctgttgttcagatcgagtaaataa
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