Tigriopus californicus (tidepool copepod): 131880641
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Entry
131880641 CDS
T09700
Name
(RefSeq) serine palmitoyltransferase 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00600
Sphingolipid metabolism
tcf01100
Metabolic pathways
Module
tcf_M00094
Ceramide biosynthesis
tcf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131880641
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcf01007
]
131880641
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
131880641
Amino acid related enzymes [BR:
tcf01007
]
Aminotransferase (transaminase)
Class II
131880641
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
131880641
NCBI-ProteinID:
XP_059083302
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Position
5:complement(5631933..5641103)
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AA seq
522 aa
AA seq
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MAGGNPSPRSETPLDLDADHPESMWRQCVDFAVTFSQVPSYHLILEGFLISWVVWLLVRR
VSNRNKRLRAEKLTKEEEEELLAEWTPEPLVPEVDPNHPALHVPVVDGKPGKHINIDGRD
CLNLATHNYLGFAGNEIVEKSAIECIRKFGVGSCGPRAFYGTADIHVYLEEKLASFLGAE
QAVLYSYGFSTIASAIPAYAKKGDIIFVDECVNFAIQKGLDASRSKIKYFRHNDVDHLRQ
LLEQQANEDKKHPKQAKVSRRFLIVEGIYMNTGTLCNIEPMLALKRQYKLRLFIDESVSF
GTIGEHGRGITEYKNISMDDIDLIMATLEYAIGSIGGFCVGTTYVVEHQTLAGLGYCFSA
SLPPMLAAGAFKAIELMEQDLGMFQQLREKAEEMHNGFEDLLGLKLVGERFSPVKHLRLE
SSRGNREEDKAVMASIITKAREEGIALVMASYLEDAEAHLPPVSIRLTCSTLLSLEDIRR
ASKIVHEICDNLFSPLETAKDGVEQQVDQIQPSESTSQFAEF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgggaatccatctccccggagtgagactcctctggatttggatgcggaccat
cctgagtctatgtggcgacagtgcgtggattttgcggtcactttctcacaggttccctct
tatcatctgatattagaaggatttctgatatcctgggtggtttggctcctggttcgccgg
gtttccaatcgaaacaaacgtcttcgagccgagaagctgaccaaggaagaggaggaagag
ctcttggccgaatggaccccggaacctctggtccccgaagttgacccgaatcaccccgcc
cttcacgtcccagtcgtggatggaaagccgggaaagcacatcaatatcgatggccgagat
tgtttgaatttggccacacataactatttgggcttcgcgggcaatgagatcgtggagaaa
tcggccatagagtgtatccgaaaatttggggtgggatcttgcggtcctcgagcattttat
ggcactgcggatatccacgtctatttggaggaaaaattggcctcgtttttaggcgccgaa
caagccgtgttatattcttatggattctccaccatcgcgagtgccattccggcttatgcc
aagaaaggagatattatcttcgtggatgagtgcgttaattttgccatccaaaaaggtctg
gatgcatcccgaagcaagatcaagtacttcagacacaacgatgtggatcacttgagacag
ttgctggagcaacaagcaaatgaagacaaaaagcatcccaaacaagccaaagtgagtcgc
cggttcctgattgtggaagggatttacatgaataccggcactctgtgcaatattgagccg
atgttggctttgaaacgccaatacaagttgcgactcttcattgacgaatcagtgtccttt
gggaccattggcgagcatggacgagggatcacggagtacaagaatatttcaatggacgat
atcgatctcatcatggccacattagaatatgcgattgggtcgattggaggattttgtgtg
ggcaccacttacgtcgtggaacatcaaaccctggctgggttagggtactgtttttcggct
tcattgccacccatgttggcagctggggccttcaaggccattgagctcatggaacaggat
cttgggatgttccaacaactccgtgagaaggctgaggagatgcacaatggattcgaggat
ctccttgggttgaaattggtaggagagcgattctcacccgtcaaacatttaagactcgag
agctcacgtggaaatcgggaagaggacaaagctgtgatggcttccattattactaaggcc
agagaggagggcatcgctttggtgatggccagctacttggaagatgcggaagctcatttg
cctccagtgagcatccgtttgacttgctcgactcttctctcgctcgaagatataaggaga
gcctcgaaaattgttcacgagatatgcgacaacctattctcgcccttggaaacagctaaa
gatggagtggaacaacaagtggaccaaatccagccctcggaaagtacttctcaattcgct
gaattctaa
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