Tigriopus californicus (tidepool copepod): 131880643
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Entry
131880643 CDS
T09700
Name
(RefSeq) FMRFamide receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131880643
04081 Hormone signaling
131880643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tcf04030
]
131880643
G protein-coupled receptors [BR:
tcf04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
131880643
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
DUF6476
Motif
Other DBs
NCBI-GeneID:
131880643
NCBI-ProteinID:
XP_059083303
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Position
5:5628138..5631857
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AA seq
390 aa
AA seq
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MSNLPLFEVIVHGFLICIVSIIGLLGNIICLAVLSKDAMRNSINCLLMGVAIIDLVLITS
AGVLFSLPTLETFLVEHHGVSYGWLDLYRFTPLVYPMAMTAQTASVYLTVAIAFERYIVV
CRPFLSRQVCTLGRSQRCVVAIIICSLLYNITRFFEYELVQDTVDWDGNTTLVYLRSSEM
RENPLYVKIYINWMYMVFMYMLPFSILLFLNLRIGWELRRARLARIHMTSAQKNEEGCAI
MLIIVVMIFMLFNAPAMVSNIIEAFGFEAVELTQVSNLLVVVNSSVNIFVYNIFSRKFRQ
ICFGLLTCGRNPPLSRVPSGQDPGRNDPKTSLRRLAKLQTLNAHDVIARAQISTSSASKD
NYVQSVSVETIGTGTQSYRGVLTRLSSYSI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcttcctttgtttgaagtgatagtccacggatttctcatctgcattgtgagc
attattggcttgttgggcaacatcatttgtttggcggtgctcagcaaggacgccatgagg
aacagtatcaactgtctcctcatgggcgtggccatcattgatttggtcctaatcacctca
gccggggtcctctttagtctgccaaccttagagacgtttctcgtggagcaccacggagtc
tcttacggttggcttgatttgtatcgcttcacccccttggtttatcccatggccatgaca
gcccaaactgcctcagtgtacttgaccgtggccattgcctttgagagatacatcgttgtg
tgtcgacctttcctctccagacaagtgtgtaccttggggcggtctcaacgatgcgtggtg
gccatcatcatctgttcattgctttacaacatcactcgcttcttcgagtatgagcttgtt
caagatactgtggattgggacggaaatactaccttggtctatctgaggagctcagagatg
cgtgagaatccactgtatgtgaagatctacatcaactggatgtacatggtgtttatgtac
atgcttccattctcaatcttgttgttcttgaacctccggattggatgggagctgcgccga
gctcgtttggcccggattcacatgaccagtgcgcagaagaatgaggaagggtgtgccatc
atgctaatcatagtggtcatgatcttcatgttgtttaatgcgcccgcaatggtgtccaat
atcattgaagcgtttggcttcgaagcagttgagctcacgcaggtttcaaatcttcttgtg
gtggtgaactcatcagtcaacatattcgtgtataacattttcagtcgcaaattcagacag
atatgcttcggtttgttgacctgtggtaggaatccgcctctgtcacgcgttcctagtgga
caagatcctgggcgtaatgatcctaagaccagtttgcggagactggccaaattacaaact
ttgaatgctcacgatgtgattgctcgtgctcaaatctccacatcgagtgcttccaaagac
aactatgttcaaagtgtgagtgtggagaccataggaaccggaactcaatcgtaccgtggg
gtattaacacgattaagctcgtactccatctag
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