KEGG   Tigriopus californicus (tidepool copepod): 131880657
Entry
131880657         CDS       T09700                                 
Name
(RefSeq) protein phosphatase PP2A 55 kDa regulatory subunit-like
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    131880657
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tcf01009]
    131880657
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcf03019]
    131880657
   03036 Chromosome and associated proteins [BR:tcf03036]
    131880657
Protein phosphatases and associated proteins [BR:tcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     131880657
Messenger RNA biogenesis [BR:tcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     131880657
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     131880657
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 131880657
NCBI-ProteinID: XP_059083320
LinkDB
Position
5:8126075..8130370
AA seq 449 aa
MAGLMSNANSSEVQWCFSQVKGTLDDDVTEADIISCVEFNQDGDLLATGDKGGRVVIFQR
DPGSKVSTPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLKRKNPAHFLLSTNDK
TIKLWKVSERDKRAEGYNLKEDNGLLRDPSSINSLRVPVLKPMELMVEASPRRIFANAHT
YHINSISVNSDGETYLSADDLRINLWHMEITDQSFNIVDIKPANMEELTEVITASEFHPR
ECNLFVYSSSKGTIRLCDMREAALCDSHAKMFEEPEDPTNRSFFSEIISSISDVKFSNSG
RYMISRDYLSVKVWDLHMETKPIETYTVHEYLRSKLCSLYENDCIFDKFECCWNGNDTAI
MTGSYNNFFRMFDRNSRKEVTYEASRDIAKPKTLLKPRKVSTGAKRKKDEIHVDCLDFHK
KILHTAWHPDENIIAVAATNNLFLLQDKF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcgggtttgatgtccaatgccaattcgagtgaggtccagtggtgcttttcccaagtt
aagggtaccttggatgacgatgtgacagaagcggatatcatctcgtgcgtggagttcaac
caagacggcgatttgttggccacgggcgacaaaggtggccgagtggtgatctttcaacgg
gatccggggtccaaagtgtccacgcccaaacgcggggagtacaacgtctacagcaccttt
caaagtcacgagcctgaatttgattacctgaagagtttggaaattgaggagaaaatcaac
aaaatccgatggctcaagcgcaagaaccccgcccattttctgctctccaccaatgataaa
accatcaagttgtggaaggtatccgagcgtgacaaacgggctgaaggttataatctcaag
gaggataatggacttctgcgcgatcctagctccattaattcattaagggtccccgtgtta
aagcctatggaacttatggttgaagcttcacccaggcgaatttttgccaatgcccacact
taccacatcaattccatttcggtcaattcggatggagaaacatacttgtctgccgacgat
ctgcgcataaatctttggcacatggaaatcactgatcaatccttcaatattgtcgatatc
aagccagcaaatatggaagagttgaccgaggtcatcaccgctagtgaattccatcctcga
gaatgtaatctcttcgtctattcgtcaagtaaaggcactattcgactctgtgacatgcga
gaagccgctctttgcgattctcatgccaaaatgttcgaagagccagaggatccaaccaat
cgcagttttttctccgagatcatctcctccatatcggatgtgaagttctccaactcaggt
cgctacatgatctcgcgtgattatctgtcggtcaaagtctgggatttgcacatggaaacg
aaacccatcgaaacctatacggtccacgaatacttacgttcgaagttgtgctcattgtac
gaaaatgattgcatatttgacaaattcgagtgctgttggaacggaaacgacaccgccatc
atgactggctcgtacaacaacttcttccgcatgtttgatcgcaattcaaggaaggaggtg
acttacgaagcctcgagagacattgccaagcccaaaaccttactcaaaccaagaaaagtc
agtaccggtgcgaagaggaagaaagacgagatccacgtggactgccttgacttccataaa
aagatcctacacactgcgtggcatccggacgaaaatattatcgcagtggcagctaccaat
aacctatttcttcttcaggataagttttag

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