Tigriopus californicus (tidepool copepod): 131880657
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Entry
131880657 CDS
T09700
Name
(RefSeq) protein phosphatase PP2A 55 kDa regulatory subunit-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
tcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131880657
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131880657
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcf01009
]
131880657
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131880657
03036 Chromosome and associated proteins [BR:
tcf03036
]
131880657
Protein phosphatases and associated proteins [BR:
tcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131880657
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131880657
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131880657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
131880657
NCBI-ProteinID:
XP_059083320
LinkDB
All DBs
Position
5:8126075..8130370
Genome browser
AA seq
449 aa
AA seq
DB search
MAGLMSNANSSEVQWCFSQVKGTLDDDVTEADIISCVEFNQDGDLLATGDKGGRVVIFQR
DPGSKVSTPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLKRKNPAHFLLSTNDK
TIKLWKVSERDKRAEGYNLKEDNGLLRDPSSINSLRVPVLKPMELMVEASPRRIFANAHT
YHINSISVNSDGETYLSADDLRINLWHMEITDQSFNIVDIKPANMEELTEVITASEFHPR
ECNLFVYSSSKGTIRLCDMREAALCDSHAKMFEEPEDPTNRSFFSEIISSISDVKFSNSG
RYMISRDYLSVKVWDLHMETKPIETYTVHEYLRSKLCSLYENDCIFDKFECCWNGNDTAI
MTGSYNNFFRMFDRNSRKEVTYEASRDIAKPKTLLKPRKVSTGAKRKKDEIHVDCLDFHK
KILHTAWHPDENIIAVAATNNLFLLQDKF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgatgtccaatgccaattcgagtgaggtccagtggtgcttttcccaagtt
aagggtaccttggatgacgatgtgacagaagcggatatcatctcgtgcgtggagttcaac
caagacggcgatttgttggccacgggcgacaaaggtggccgagtggtgatctttcaacgg
gatccggggtccaaagtgtccacgcccaaacgcggggagtacaacgtctacagcaccttt
caaagtcacgagcctgaatttgattacctgaagagtttggaaattgaggagaaaatcaac
aaaatccgatggctcaagcgcaagaaccccgcccattttctgctctccaccaatgataaa
accatcaagttgtggaaggtatccgagcgtgacaaacgggctgaaggttataatctcaag
gaggataatggacttctgcgcgatcctagctccattaattcattaagggtccccgtgtta
aagcctatggaacttatggttgaagcttcacccaggcgaatttttgccaatgcccacact
taccacatcaattccatttcggtcaattcggatggagaaacatacttgtctgccgacgat
ctgcgcataaatctttggcacatggaaatcactgatcaatccttcaatattgtcgatatc
aagccagcaaatatggaagagttgaccgaggtcatcaccgctagtgaattccatcctcga
gaatgtaatctcttcgtctattcgtcaagtaaaggcactattcgactctgtgacatgcga
gaagccgctctttgcgattctcatgccaaaatgttcgaagagccagaggatccaaccaat
cgcagttttttctccgagatcatctcctccatatcggatgtgaagttctccaactcaggt
cgctacatgatctcgcgtgattatctgtcggtcaaagtctgggatttgcacatggaaacg
aaacccatcgaaacctatacggtccacgaatacttacgttcgaagttgtgctcattgtac
gaaaatgattgcatatttgacaaattcgagtgctgttggaacggaaacgacaccgccatc
atgactggctcgtacaacaacttcttccgcatgtttgatcgcaattcaaggaaggaggtg
acttacgaagcctcgagagacattgccaagcccaaaaccttactcaaaccaagaaaagtc
agtaccggtgcgaagaggaagaaagacgagatccacgtggactgccttgacttccataaa
aagatcctacacactgcgtggcatccggacgaaaatattatcgcagtggcagctaccaat
aacctatttcttcttcaggataagttttag
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