Tigriopus californicus (tidepool copepod): 131880664
Help
Entry
131880664 CDS
T09700
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131880664
Spliceosome [BR:
tcf03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
131880664
Other components
Complex C specific factors
131880664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
BRE1
ANG-1
COG5_N
Motif
Other DBs
NCBI-GeneID:
131880664
NCBI-ProteinID:
XP_059083327
LinkDB
All DBs
Position
5:5109078..5111915
Genome browser
AA seq
854 aa
AA seq
DB search
MANEDEVLAFTITDQDLADEMHLGFGFGRSSRKRGSQNRAIYGVWAADSDEEDADDHQVQ
GRASLKKGYTGPVGFVSAGIQGAQPEPASISDDEGAAESRLGPEGRTQPLDSSDEDEGSF
RMRPGHRAAPSHHPAQLEAVAGQMAGLRTAQSHARQGDVRLGRGFGDWEKNTRGIGSKLL
LKMGYQVGKGLGKSLQGRSDIVEAHLRRGRGAIGAYGREGGGPKATAAAAAAATVDSEEE
EDRQFRQARNQWRKEASGGSRTRVKTVYKSADQILAEGQWRKIQPEAPAALNRVKVIDMT
GREQRVLSGYHAISAQQLPDDEIEPDQVEFAIPELMHNMDLLVKHCEEDIIQADRKLKHH
RNNVELLQKEEEKLSVLVERESNVIQSLESVLTIVEQIESLHESAQLDLVTAQALFQRMS
TEFPAEYQDYGLPHIAVTVVSPLLKAEMNEWDVLAQPSRYRPLWLQWKALLNTSGGTPIS
SVQHEADPFYNLLWESWMIHVRLAIQKWDARNPDQLIDFLKTWTPVVHPSIMENIQNLVV
LPKLQSTVESWNPMSDPIPIHAWTHPWLEVLGQRLDVVFPTIKNKLSAALTAWHPSDRSA
RLILLPWVDVFDSASMYAFLLKNIVPKLEKVFASFEINPSQQNMDVWEWVMDWDGFLPSP
TIVNILEKIFFPTWLKVLAQWLNHNPNYTEVTRWFEGWKSELASLKDVLKHQQIWTFLGH
ALEMMVRAVSGGTPMSLQPGAMEAMQYLKTREMSGKPSFRPTPPPMAAPTNLTSTGSSVG
ASSLPSASVGFKDLVIRRCEEHNLTFAPRHGRTYQGKQIYQCGRNMLFLDNNVIFVQKKG
AWVPSSLNDLMDSS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaagatgaagtcctggccttcaccatcaccgaccaagacttggccgatgag
atgcacctgggctttggctttggccgatccagtcgtaagcgtggcagccagaatcgagcc
atttacggcgtgtgggccgcggattccgacgaggaagacgccgatgaccaccaagtccag
ggacgggccagtttgaagaagggctacactggtccggtaggattcgtttcggccgggatt
caaggcgctcaacctgagcccgcatcaatttcggacgacgaaggggccgctgagtcgcgc
ttgggacccgaggggcggacccaacctttggattcgagtgatgaggacgagggatcgttt
cgaatgcggccgggccatcgagccgcccccagtcaccacccagcccagttggaagcagtg
gctggccaaatggccggtctgcgcaccgcccagtcccacgctcgtcaaggcgatgtccgc
ttgggacggggatttggggattgggagaagaatacgcgcgggatcggatccaagttgttg
ctcaagatgggttatcaagtgggaaaaggtttgggaaagtctctccaaggtcgatcggac
atcgtggaggctcatttgcgccgaggtcgcggtgctattggggcctatggacgcgaagga
ggtggacccaaggccaccgccgcagccgccgcagccgccacggtggattcggaagaagag
gaggatcggcaatttcggcaagcccgcaaccaatggcgaaaagaggccagtggtggatct
cgaacccgcgtcaagaccgtgtacaaaagcgctgaccaaattctagccgaaggtcaatgg
cggaagatccagccagaggctccggcggccttgaatcgcgtgaaagtgatcgatatgacg
ggtcgcgaacagcgggtactcagtggttatcacgccatcagtgctcagcaattgcccgat
gatgagatcgaaccagatcaggtcgagttcgccatccctgagctgatgcataacatggat
ttgttggtcaaacactgtgaggaagatatcatccaagccgatcgaaagctgaaacatcac
cgcaacaatgtggagcttcttcaaaaggaggaagaaaagctgtccgttttggttgagcgc
gagtccaatgtcatccagtctctggaatccgtgctaaccatcgtggaacagatcgaaagc
ctccatgaaagcgctcagctggatttggtcacggctcaagctctatttcaacggatgagt
accgagtttccggccgagtaccaagactacggcttgccccatattgccgtcaccgtggtt
agtccattgctcaaggccgagatgaatgagtgggacgtcttggctcaaccctcgcggtat
cgacctctctggttacaatggaaggcattgttaaacactagtggtggcacgcccatatca
tcagtccaacacgaagccgatcctttctataacttgctatgggaatcctggatgatccat
gtccgcttggccattcaaaagtgggatgcacgcaaccctgaccaactcattgattttctc
aaaacttggaccccggttgttcatcccagcattatggaaaacattcagaacctcgttgtt
cttcccaagctccaaagcaccgtcgaatcatggaaccccatgtctgatcccattccgatt
catgcttggacgcatccgtggttagaggttttagggcaacgcttggacgttgtgtttccc
accataaagaacaagttgtccgccgcactcacggcctggcatccctcggaccgtagtgcc
cgtcttattcttttgccgtgggtggatgtttttgactcggcatccatgtacgcctttctt
ctcaagaacattgtaccgaaattggaaaaggtgtttgccagctttgagattaatccgagc
caacaaaacatggacgtttgggaatgggtcatggattgggatgggttcttgccttcaccc
accattgtcaatatactggagaaaatctttttccccacatggcttaaggtcttggcccaa
tggctcaaccataatcccaactataccgaagtcacgcgctggtttgagggttggaaatcc
gaattggctagtttaaaggacgtccttaaacatcaacagatttggacattcctcggccat
gctctggaaatgatggtgcgagccgtctctgggggtacgccaatgtctttacaacccggt
gcgatggaggccatgcaatacctgaagaccagagaaatgtccggcaaaccgtccttccgc
ccaacaccgcccccgatggcagcccccaccaatttgacgtccactggatcatcagttgga
gcatcgtcactgccgtcagcctctgtaggcttcaaagatcttgtaatccgaaggtgcgaa
gagcataatttaacatttgccccccgtcatggtcgaacctaccaaggcaaacaaatctat
caatgcggtcggaacatgctgtttttggataacaatgtcatcttcgttcaaaagaaaggg
gcatgggtgccatcatccctaaatgacttgatggattcttcgtga
DBGET
integrated database retrieval system
