Tigriopus californicus (tidepool copepod): 131880709
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Entry
131880709 CDS
T09700
Name
(RefSeq) pickpocket protein 28-like
KO
K03440
acid-sensing ion channel, other
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880709
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
131880709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Sir1
Motif
Other DBs
NCBI-GeneID:
131880709
NCBI-ProteinID:
XP_059083376
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Position
5:3348486..3353716
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AA seq
524 aa
AA seq
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MRHTKVSQRNSSSCTILWALTVLTSLILSGFFIAPIVQKFSDSPTYTTVANTNYPIWHLD
FPAISICPNIRIDSKRLKEVLRNEPWSKLDKYSLDQVLPKVLKKYLFLPGMDSNFEDVEA
DMKSFVDQYHQYIPQLLRSSIYSCQSLFQNCKWQGIATLCSDLFEMRKTDLGYCCSFNTV
RQAEQFDFQDDEGFSFHNYYGEDYFELVDYTLENMYDNDENIYANDEDPTKRKRRSTPEV
SKPKVTRLRRTNSAGTSLGLSFSIVIPERSTDDYTIAAFDGFKVQIHSPYDFPEVEGRGL
AVATNQIAFISVSASITRSTENVKAMNRDRRNCFLSDEELDDYYIADGVQFNTFDNYTQK
SCLLECQAHLIFKECQCIPHYFPSFSKALGQNTTCNHTGLDCLINHQHLLNALKPDDEEH
SHQLMEGAKCNCPQQCDETVYMTEFSQVPKSSSVSSKEAGFGNTSDVYVYFKQFGVIEFS
RDQLFSLADLIGALGGIMGLFVGFSVLSGVELIYWFTLRLFNNH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacaccaaggtatcgcaacgaaactcaagctcgtgcacaatcttgtgggcgctg
accgtgttaacgagcttgattttgtcgggatttttcatcgctccaattgttcagaagttt
tctgatagcccaacttataccacggtggccaataccaattatcccatttggcacttggat
tttcctgccatttccatttgtcccaatatccgtattgatagcaaacgattgaaagaagtc
ctgaggaatgaaccatggtccaaattggacaaatactcgctggatcaggttctcccgaaa
gttttgaagaaatacttgttccttcccggaatggattcgaattttgaggatgttgaggct
gatatgaagtcttttgtggatcaatatcatcaatacattccacagttattaagatcgtcc
atctattcctgtcagtccttgttccaaaattgcaaatggcaaggtatagcaacactttgc
tcagatttgtttgaaatgcggaaaaccgatttaggttattgttgctcattcaatacagtc
cgacaagccgagcaattcgacttccaggatgatgagggcttttccttccacaattactat
ggggaagactattttgaattggttgattacaccttggaaaatatgtatgacaacgatgaa
aacatttatgcaaacgatgaagacccaaccaaaaggaaaaggagatcaacaccggaggtc
tcaaaacccaaagtgacacgccttagacgaaccaatagtgctgggacatctctcggttta
tcgttttctatagtgatccctgagcgctcgactgacgattacacaatcgctgctttcgac
gggtttaaggttcaaatccatagtccttatgattttccggaagttgaaggccgtggatta
gctgtggctacaaaccaaatagccttcatttcggtctcggcctctattacacgaagcact
gaaaacgtcaaggctatgaaccgagacagacgcaattgcttcctaagcgacgaagaatta
gacgattactatattgccgatggtgtccaattcaatactttcgataactacacccagaaa
tcgtgcttattggagtgtcaagctcatcttatctttaaagagtgccaatgcattccacac
tatttccccagcttttccaaagccttgggtcaaaatacgacttgtaatcacactggtctg
gattgtcttataaatcaccagcacctgctaaacgccttgaaacccgatgatgaagaacat
agccaccaacttatggaaggggctaaatgcaattgtcctcaacaatgtgacgagaccgtg
tacatgacggagttttctcaagttccaaagtcgtcgtccgtctcgagtaaagaggctgga
tttggcaatacatcggacgtctacgtctattttaagcagtttggtgtgattgaattctcc
cgagatcaactattctcgttggcagatctcattggagctttgggaggaatcatgggattg
ttcgttggattcagcgttttgagtggagtggaacttatttattggttcacacttcggcta
tttaataaccattga
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