Tigriopus californicus (tidepool copepod): 131880734
Help
Entry
131880734 CDS
T09700
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880734
Ion channels [BR:
tcf04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
131880734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
Protocadherin
Syndecan
VWA_2
TMEM154
Baculo_11_kDa
Glycophorin_A
Orf78
DUF2970
DNER_C
Tmemb_9
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
131880734
NCBI-ProteinID:
XP_059083409
LinkDB
All DBs
Position
5:4329540..4369775
Genome browser
AA seq
1200 aa
AA seq
DB search
MFCDSSFVFATMGKMPVFRFVWAAWQLILLLLWNDPKVSGTIMTRLQVTKGVYSKVTVRV
DDMEQPVDCEDFLSKLEVLLNETSHGLYELTENQSYIASIEVHLPKSWNQHQCQSRTRKV
RFSQFVSNPDISVGTQSLFGSWPSQPWTEQPGACGQSGLRVHIPMRFISTLEPFNAQSDL
HTRGQSLLREWCKYRYGVFPESGVLHGGDRMYPHVYNEGNVTLVNAGCEREEPFCPLGKP
YNRRAPTKQNLLCHELSAMETILNHEDFKMNVTANHSVPYRSPEISFYLPKSSKYTIVLE
RTSVMDINGRWTNIKRAFFRFLQHLPLGSEVSIITFGKEATLNLPPTVVTDVNREGLHGR
IPRKVLPEDLACVFCAVNMSYNNLRRDSSDRTDSGTVILVTGSPRRPQLLEQLVNVAAGS
AVKVFPIIYPGTAYPEIVKLAANAKHYAVPEDEAVSSLTYLSEVLFDILHVAEGLEIQKI
HETKHLSYEFAGTFTLEEEMLHHMSVTMSIDDEEKVEFFEITNPSGKKHLFSKFEDGMVV
FNHPGLAQSGIWTYHAKLYPTSGLPNDQILVDVVSQSNNAEANPTLLEVFTNIDHMEADV
YKTPCIIYARLTQGGQMPVINARITVRVFLPDALPSNVVHLTLRDDGSAYPDITANDGIY
SAYFTEFASVPGFYSIEATATHNEGQARTIKQQMGSKPTVLPNSTTVEEDFRNPENCCGS
HVEFVETLPTSPFHRQTVGTGFYIKQGISPRTDIAAPSRILDFRVSRIINDSLYVELEWS
APGGDFDKGKADKYEIRCYTNREALTNEQSFKEMGILVHDSFTPKPVAFGQRQTCTVGVP
WPNEIFFYAIIASDKTGNQSPISNIISVYIPEKTSSSTELPPQLASDDLNQVNQQPLSEY
DEYGSMSNAERERRSQQIKVYIIIGVISGLLLLILLVIFIVLIRVRTKKAEYDADERDTY
KAYEPAVPTKSVMLPDVVESKSVTQTAKALSNWLDSLPRSEGSPNTTAHDLSIEGGTLKR
PHNNYALSKTNPYRHKVLTNGSFLNLKDCGGSHSSHGDDSSRPTTSTEDSNPGSSQNSES
GESRQSILKRSNTTSSSSKVIDTSTARAIIDTYSGNLFTRGSDQYASYRGYSNPPLSSGL
FVTTPPTNPALEIDQDSLEPHINQKYPHAIPAPVLNGEPGENLFILPRNSLMRTRTESVV
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgactcttcgtttgtgtttgctacgatgggaaaaatgcccgtgtttagattt
gtgtgggccgcgtggcaacttattttgttactgttatggaacgatcccaaagtgagtgga
acgatcatgaccagacttcaggtgaccaagggagtgtattcaaaagtgacagtccgggtg
gatgacatggagcaacccgttgattgtgaggattttctaagcaaacttgaggtgttgctc
aacgagacctcccatggtctctatgaattgacggagaaccagagctacattgcgtccatt
gaggtgcatctacccaaatcgtggaatcaacaccagtgtcaatcacggacgaggaaagtg
agattctcgcagtttgtctcgaatcccgacatttccgtgggaactcaaagtctcttcggc
tcctggccttcccaaccctggaccgagcagccgggtgcctgtggacagtccggcttgcgg
gttcacatccccatgaggttcatctccactttggagccattcaatgcccagagtgatctt
cacaccagaggtcagagtttgcttcgtgaatggtgcaagtatcgctacggagtgtttccc
gagtctggcgtcctccacggtggagaccgaatgtacccgcatgtttacaacgaaggcaat
gtgaccctggtcaatgccggatgcgaacgggaggaaccattctgtccgttgggaaagcct
tacaatcggcgggctccgaccaagcagaacctcctgtgtcacgaattgagtgctatggag
acaatcttgaatcatgaggacttcaagatgaatgtcacggccaatcattcagtgccctat
cgttctcccgagatctcattctacttgccaaagtccagcaagtacaccattgtcctggaa
cggacgagtgtgatggatatcaatggacgttggaccaacatcaaacgggcgttttttcga
ttccttcaacaccttccgctgggctcagaagtgagcattatcaccttcggcaaagaggcc
acccttaacttgccccctacagtggtgacggatgtcaaccgagagggtcttcatggtcgt
atacctagaaaagtgctgccagaggatttggcctgtgtattctgcgccgtcaacatgtcg
tacaacaacttgagacgtgacagctcggacaggacggactcgggaacggttattttggtc
accggatccccgaggcgacctcagctcttggagcaattggtcaatgtggctgctggatct
gcagtgaaggtgttcccgatcatctacccgggaacagcgtatcccgagatagtaaagcta
gccgctaacgccaaacactatgctgtgccagaggatgaggccgtgagttcacttacctac
ctgtcggaggtgttgtttgacatcctacatgtagctgaaggtttggagattcagaaaata
catgagaccaaacatctcagttatgagtttgctggcaccttcaccttggaggaggagatg
cttcaccacatgagcgttaccatgagcatcgatgatgaggaaaaagttgaattctttgaa
atcaccaacccatctggcaagaaacatctgttcagcaagttcgaggacggcatggtggtg
ttcaaccatcctggtttggcccaatccggaatttggacttaccacgccaagttgtacccg
acatcaggtttacccaatgatcagatcttggtggacgtggtcagccagagcaacaatgcc
gaagccaatccgacccttctcgaggtgttcaccaacattgaccacatggaggcggatgta
tacaaaaccccttgcatcatctatgcccgtcttacccaaggtggccagatgcccgtcatc
aacgccaggattacggtgcgagtattcctccctgacgcactcccttcaaacgtggttcac
ttgacactaagggacgatgggtctgcttatcccgatatcacggccaatgatggtatctac
tcagcctatttcacggagttcgcctccgtccccgggttttatagtatcgaggccacagcc
acccacaacgaaggccaagcccgaacgattaaacaacagatggggtccaaaccgacggta
ttacccaattcaacgaccgttgaagaggattttagaaacccagaaaattgctgtggaagt
cacgttgaatttgtggagaccctgcctacctcacctttccatagacagaccgtaggtacc
gggttttatatcaaacaggggatctcccctcgaacggacatcgctgccccctcgaggatc
ttggatttccgagtgtccaggatcatcaatgactcgctctacgtggaattagaatggtcg
gctcctggtggagatttcgacaaaggaaaagccgacaaatacgagattcgatgctacacc
aatcgtgaggccttgacaaacgagcaatccttcaaagagatgggaatcctcgttcacgac
tcattcacgcccaagcctgtggccttcggtcaaagacaaacttgtacggtgggtgtgccg
tggcctaacgagatatttttctatgccattatcgcctcggacaagaccggaaatcaaagt
cccatctcgaatatcatttcggtgtacattcccgaaaagacgagctccagtaccgaattg
cctccgcaattggcctcagacgacctgaaccaagtcaatcagcagccattgtctgaatac
gatgaatacggctctatgtccaatgctgaacgagaacggcgatcccagcagatcaaggtc
tacattatcatcggggtgatctccggattgctcctcttgatcctcttggtgattttcatc
gttctgattcgggtgcggaccaagaaggccgaatatgatgcggatgaacgggacacttac
aaggcctacgaaccggcggtgcccaccaaatcagtcatgcttcccgatgtggtggagagt
aaaagtgtcactcaaacagccaaggccctatccaattggttggactctctcccccgatct
gaaggcagtcccaataccacggctcatgacctgagtattgaaggtgggactttgaagcgt
cctcacaataactacgcactaagtaagaccaatccgtaccgccacaaggtgctcaccaac
ggcagtttcttgaatctgaaagactgcggaggcagtcattccagtcacggagatgattca
tccaggcccaccacctccactgaggacagtaatcctggaagcagtcagaactccgagtcc
ggcgagtctcgtcagagcatcttgaaacgaagtaacaccacttcatcttcgtccaaagtc
atcgatacctcgacagctcgagccatcatcgacacctacagtggcaacttgttcacacgg
gggtcggatcaatacgccagctatcgtggctattcgaacccacccctcagtagtgggcta
ttcgtgaccacaccgcccaccaatccggccctcgagattgaccaagacagtcttgagcct
cacatcaatcaaaagtatcctcatgccattcccgcaccagttttgaatggcgaacccggc
gagaatctgttcattttgccgcggaattcgctgatgcgcacgcggacggaatccgttgtg
tag
DBGET
integrated database retrieval system
