Tigriopus californicus (tidepool copepod): 131880757
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Entry
131880757 CDS
T09700
Name
(RefSeq) autophagy protein 5-like isoform X1
KO
K08339
autophagy-related protein 5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04136
Autophagy - other
tcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131880757
04136 Autophagy - other
131880757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131880757
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131880757
Membrane trafficking [BR:
tcf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131880757
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131880757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
DUF4917
Motif
Other DBs
NCBI-GeneID:
131880757
NCBI-ProteinID:
XP_059083435
LinkDB
All DBs
Position
5:complement(4847611..4857993)
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AA seq
270 aa
AA seq
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MADDREILRELWDGRIPTSFSLASNEVETLSAPDPYYLMLPRQTYLPIATEKVRKHFSKH
VKVEHQENPMWFEFDGTPLQWHRPLGVLYDLAVMNSDGEARPPWSLVVHFDNYPHQEILR
LDSPQAVEMNFMSSIKEADFIKHAGKIISTMQKKDHLQLWQGLQNDKFDQFWAVNRRLME
RMSGEEGFKAIPVRIYRGDQMILQKLYKTIGPERKKRTLQDLLDEAFPDEDNSDALMVST
QGITPPRETPLQWLSEHLSYPDNFIYLCVK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatcgcgagatcttgcgcgagctctgggatggacggatccccacatctttt
agtttagcctccaatgaggttgaaaccctgagcgctccggatccgtattacttgatgttg
ccacgacagacctatttacccattgctaccgagaaggtacgtaagcacttctctaaacac
gtcaaagttgaacatcaagagaaccccatgtggtttgagtttgatggcacacctctccaa
tggcaccgtccattgggcgttctctatgatctagccgtcatgaattctgatggcgaagcc
agacccccttggtctctggtggttcacttcgataactatcctcaccaggaaattctccgt
ctggattcgccgcaagcagtagagatgaacttcatgtccagtatcaaagaagccgatttt
attaagcacgctgggaagatcatttcaaccatgcaaaagaaagatcatctgcagttatgg
caaggtctgcaaaatgacaaatttgatcaattttgggccgtgaaccgacgtctcatggag
cgaatgtctggcgaggaaggattcaaggctattccggtacgcatttatcgtggcgatcag
atgattctccagaaattgtacaaaaccattgggccggagcggaagaagcggactctccag
gatctcttagatgaagctttccccgatgaggataacagcgacgctcttatggtttccact
caaggcataacaccccctcgagaaacgcccctccagtggctttctgaacatcttagttat
cccgataacttcatctacttatgcgtcaagtga
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integrated database retrieval system
