Tigriopus californicus (tidepool copepod): 131880761
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Entry
131880761 CDS
T09700
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00600
Sphingolipid metabolism
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131880761
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
131880761
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
131880761
NCBI-ProteinID:
XP_059083442
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Position
5:7754062..7756322
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AA seq
539 aa
AA seq
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MSYPSSPPRVGRGARVASGQALSGFLNRSAHQLFGGMSSNASGGYQPYYGSNPSGHSPPQ
PYSPGQGGLSAQLAQVKAVLDRPPNVTSLSEKIRELDRLLSPSNAFHLTPKDLDPLFVLV
VGDIFGSQAVQAAKYGRGWHLTTLTKHRQYRDFSAALQFLSSSGGGMMNLIQFLMLDSTC
VYDFPVNRLPTTHPLRIKATAHVNGLFSGLNSGSGMDPSQTSVPLSPFEYYFHHFFALIS
QGSEWLYQSGANLEAESLYPILFEDYLSHFLPIGGADYRFQVSDLVLPHPPTPASLRSQA
GTPGSASQGKLSSLLRADFSHSKKSNLNESNELLQSSRSGAELWKSQVFLDTLNQFWLRS
YAIPLEPGVDLSPPSDLVKLIRMFIKHLHFFFNGFHPSQSELRDSLQRSIFREVYDSLYI
FFDYQFDHWPLDMSFRLILETWLSFVQPWRYKDPNQGEKDGGTFEADQWKHFLVNNGEFF
DHLLRKVLLRFFRMDLGCSKNAFMLFRVMKVVSQEGLPQTLSTSPGEILSAKKFMTNLN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagctacccgagctcaccacctcgtgttggccgtggtgcccgtgtggccagtggacag
gccttgtccggatttctcaaccgctctgcccatcaacttttcggcggcatgagctccaac
gcctcgggcggatatcagccttattatggctctaatccgtctggccactcgcccccacag
ccgtactcgcccggccaaggcggattaagcgcccaattggcccaggtgaaggccgtactc
gaccgcccgcccaatgtcacgtcgctcagcgagaaaatccgggaattagaccgcctgctg
agtccgagtaacgccttccatctgacgcccaaggacctggatcccttgttcgtgttggtg
gtgggtgacatttttgggagtcaggccgtacaagccgccaaatatggtcgaggttggcat
ctgactaccctcaccaagcaccgtcaatatcgggatttttccgcggccctgcaattcttg
tccagttccggcggaggaatgatgaatttgattcaattcctcatgttggattcgacttgc
gtgtacgatttccccgttaatcgcttgcccaccactcatccgttgcggatcaaggccacg
gcacatgtgaatgggctcttctcgggtttgaactcgggttcggggatggacccgtcacaa
accagcgtgccactgagtccctttgaatattatttccatcatttcttcgcgctcatcagc
caaggatcggaatggctatatcagagtggagctaacctcgaagctgagtcgttgtatccg
atccttttcgaagactatctctcccattttctgcccattgggggagcggattaccgattc
caagtgagtgatctagtcctgccccaccctcccacgcccgcctcactgaggtcccaagcg
ggcacacccggttccgccagccaaggaaaactgtcgtccttgttgcgtgcggatttttca
cattcaaagaaatcgaatttgaacgaatcgaacgagcttttgcaatcatctcgttcgggc
gcagagttgtggaaatcccaagtgttcctggacactctgaaccagttttggctcagaagc
tacgctattcctttggagccgggcgtagatttgtcaccgcccagcgacttggtcaagctt
attcgcatgttcatcaaacatctccatttctttttcaacggcttccatccgtcccaaagc
gagttgcgcgattccctacaaagaagtatctttcgagaagtgtacgatagtttgtacatt
ttctttgactatcaatttgatcattggccattggatatgagcttccgattgattctcgag
acctggttgagctttgttcaaccttggcgctacaaagatccaaatcaaggtgaaaaggat
ggtggaacgtttgaagctgatcagtggaaacatttcttggtgaacaatggcgaattcttc
gatcaccttctgcggaaggtgttgctgcgtttctttcggatggacttgggttgcagtaaa
aacgcgttcatgctctttcgagtaatgaaagtggtgtcccaagaaggattaccccaaact
ctgtcaacttcaccgggagaaattctctcagccaaaaagttcatgacgaatctgaactga
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