Tigriopus californicus (tidepool copepod): 131880856
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Entry
131880856 CDS
T09700
Name
(RefSeq) dynein intermediate chain 3, ciliary-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
131880856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131880856
04812 Cytoskeleton proteins [BR:
tcf04812
]
131880856
Cilium and associated proteins [BR:
tcf03037
]
Motile cilia and associated proteins
Dynein arm
131880856
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
131880856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
WD40
Beta-prop_RIG_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_SPT8
Opi1
DUF533
Motif
Other DBs
NCBI-GeneID:
131880856
NCBI-ProteinID:
XP_059083558
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All DBs
Position
1:4173486..4224029
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AA seq
707 aa
AA seq
DB search
MEKPKWIQVDNLKQTEGQPPMSPMSPRMTEYALQQYQEDVTEAISREKDNVQEPNNSRLK
LKKRRIFGRTSREPDDDISEKEVEIKLEISKKAGLLNKPVNFTDVPARIDQAILPNPGIW
DNYIDKNPVHRSVQVSSEMSEHEINTERAEYLSQGMNHAEGGWPKDINPSENDQTMRFRK
KVEKDDAYVTSVLGLCTSMEQCIKQNNALEIYEDYFEIIDEATQCQVPEAKTVHVFRDPT
PSYLRPVSDISWCPDGGSRLAIAYCNLEFQAAHPDTLRESYIFHIEDPTEPELTLNLPSC
LVSVEYNPKDPNILAGGCYNGQVAWWDSRKNGNPVGMIALDQSHLDPVYKTIWVNAKSGA
EFFTGSTDGTVKWWDIRKFKEPTEVLVLDPGKDGKPKSERAHGASCLEFEPSIPTKFMVG
TDRGCVFSCNKKAKTDSEKISATYNAHFGPIYALERNPCFPKNFLTVGDWCARIWSEDIK
ESSIMWTSSYTENLTDGCWSPTRPSVFFTTRMDGCLDCWDILYQQKAPLLSIKVTDDPLH
TLSVHESGVLVATGCEGGNVNLLELTDGLASANRNDKAAVTAMFERETRREKILEARNKE
LRLKEKTKGILGLGGGGGGGGGGGGGSGTSGGSGSSSGHGKPGGGGSGAFGKMALSALKG
SKPEVPEEKKEEEEDPIAKAEREFFEIINKEKEARLERRRQKEQEHT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaccgaaatggattcaagtggacaacctgaagcagacggagggacagccaccc
atgtctccaatgtcacccaggatgacggaatacgcacttcaacaatatcaggaggatgtg
accgaggctattagccgcgagaaggacaatgtccaggaaccgaataattctcgactcaaa
ctgaagaagagacgaatattcggcaggacctcacgggaacccgatgacgacatatccgag
aaagaagtggagatcaaattggagatctcgaagaaggctggcctccttaacaagcccgtc
aatttcacggatgttccagccaggattgatcaagcgatcctgcccaatcccgggatctgg
gataattacatcgacaaaaatcccgttcacagaagtgtgcaagtctcctcggagatgtca
gagcatgagatcaacacggaaagagccgagtatttgagtcaaggaatgaatcacgcagaa
ggtggatggcccaaagacatcaatcccagcgagaacgatcaaaccatgagattccgaaag
aaggtggagaaagatgacgcttacgttacatcggttttgggcctttgtacgtccatggag
caatgcatcaaacagaacaatgcactggagatctacgaggactacttcgagatcatcgac
gaagccactcaatgtcaggtgcccgaagccaaaactgtccatgttttccgggatccaact
ccatcgtatcttcggccagtgtccgacatttcttggtgtccggatggaggctcgcgattg
gccattgcctattgcaatttggagttccaggccgctcatcccgatactttgcgagaatct
tacatcttccacatagaggaccccactgagccggaattaactttgaacctgcccagctgc
ttggtaagtgtggagtataatcccaaggatcccaatatcttagccggtggatgctataac
ggacaggtggcatggtgggattctcggaagaatggaaatcccgtaggcatgatagctttg
gatcaatctcatctggatcccgtgtataaaacgatctgggtcaacgccaagagtggtgca
gaattcttcaccggatcgacggacggaactgtcaaatggtgggatatccgcaaatttaag
gagcccaccgaagttctagtgttggatccagggaaggatggaaagccaaagagtgagcga
gcccatggagcttcatgcctggagtttgaaccgtccattccgaccaagtttatggtgggt
acagaccgaggatgtgtgttttcgtgcaacaagaaggccaaaacagattcagaaaagatt
tcagccacctataacgcccacttcggtccaatctacgccttggaacgaaatccttgcttt
ccaaagaactttctcaccgtcggggattggtgtgccagaatatggtcggaagacatcaag
gaaagttcaattatgtggaccagctcgtacaccgaaaacctcacggacggatgttggagc
cccacaagaccctcggttttcttcacaacccgcatggatggttgccttgattgctgggat
attctttatcaacaaaaggctcctttattaagcattaaggtaaccgacgacccattgcac
actctctccgttcacgaatcgggagtgctcgtggcaactgggtgtgaaggtggaaatgtc
aaccttttggaactcaccgacggacttgcatccgctaatcgcaacgacaaagctgccgtg
acagcgatgtttgaacgcgaaacgcgccgagagaagattcttgaagccaggaataaggaa
ttaaggctcaaagagaagacaaaagggatcttgggactgggaggaggaggcggtggtggt
ggaggaggcggaggaggaagtggaacgagcggtggatcaggatcgtcaagtggacacgga
aagcctggaggaggaggaagtggtgctttcggtaaaatggctttgtcggccttgaaaggc
tctaaacctgaagtgccagaggagaaaaaagaagaggaggaagatccaattgcaaaggcc
gaacgagagttcttcgaaatcatcaacaaggaaaaagaggctcgcctcgaacggagacga
cagaaagagcaagagcacacttaa
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