Tigriopus californicus (tidepool copepod): 131881012
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Entry
131881012 CDS
T09700
Name
(RefSeq) protein slit-like
KO
K06839
slit 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tcf00536
]
131881012
Glycosaminoglycan binding proteins [BR:
tcf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
131881012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
Laminin_G_1
Laminin_G_2
LRR_5
LRRNT
EGF_TEN
LRR_9
hEGF
LRRCT
JAG1-like_EGF2
EGF_CA
LRR_14
EGF_3
EGF_DL_JAG
EGF_2
EGF_Teneurin
COXG
Nucleocapsid-N
Motif
Other DBs
NCBI-GeneID:
131881012
NCBI-ProteinID:
XP_059083741
LinkDB
All DBs
Position
5:7932761..7944152
Genome browser
AA seq
1362 aa
AA seq
DB search
MKWSDVLLCLSISICLIHPILCYCPRECKCSSDGVIDCSRANLDTFPRDIPFNAHTIDLS
HNSISQFPDLSEWLEYSQIKNLDVSHNSIQCFDSQFIGSKVEHVDLRYNRLQSLRVDKSL
EDLKVRINDDETLNNCQCAKESLHKFSGVSCSESYFSPHAILCGTSSDDVVPGESICLEQ
EAMCPKDCHCNDGIVDCRDKKLDRFPSSIPHSATELRLEQNNIGSIPKNAFAKLKWLRRI
DLSNNEIRVIPDDTFNGLPRLTSLVLYGNQIERISGSSFYDLPALQLLLLNSNKIRCIHP
NAFNRLEVLHLLSLYDNNIQTLSNGTFDGLENLQTLHLGKNSFACGCDLAWLTTWLQKNP
VETSGARCETPVKLQRKKISTLHLEQSNCLDLSGSAPSCNWTAPCPYPCSCSDGIVDCSG
RGVKIIPSDLPKTTRELQLSGNVMDIIPSVGLFNLLPSLNTLNMSQNFISVIEEGSFEGA
RTITILDLSHNSLSTIRGRLLRGLDGLTTLYLHNNNIHCISPGAFDMLPKLSFANILSNP
IQCDCHMAWFGDWLRSQNNTSAVATCATPTHLKNRQLQDLPLPSFRCKGSADEGCLEQHY
CPRECVCTGTVIRCSHAQLKHVPNNVPKEASELYLDVNDITDLKMEQFSHLQRLSRLDIS
NNKISVIKPYVFANLTRLSTLIISYNEIKCIQPRAFSGLHHLRILSLHGNSISMIPKSAF
DDQNSITHLALGSNPLLCDCNLKWLSQWMKSQYIEPGIAKCSHPNSLANHLVLTTPESSF
KCQDETPQDILAKCDPCHRAPCQNNASCKAQHGLDFICDCVPGYYGTFCEKNIDACYGNP
CSHDGTCTVMEHGRFECNCPLGYSGLRCEFDINECASSPCQNDAKCIDQIGSFACDCKEG
FTGDLCHKEIDPCEDAQEKCLNEGTCVPSKSTFSCVCQPGFSGPDCSISLNDCRSHMCQN
GGTCLDGNGTYSCVCTPEFAGKYCELEPIISHLYPQSSPCQQHECKHGTCFMPKDSKDYV
CKCDSGYTGKYCEYLTSLSFDQKGAYAQMEPLNTQPFANVTMEVITLETSGILIYVGQNE
HLAVELFKGRIRVSYDVGNYPVSTMFSYENISDGLRHRIQILAHGKNLTLQVDQGQSRSI
VNEGANSEVQFRTPLYVAGCPDNVGEEALKHWHLRNISSFQGCMPSLHINDKLVDFLQAA
DVRHKVSPGCSMSELVQNAEPEDPCSPSPCKHGTCSPIEAIPGFQCTCKQGFSGVYCNQK
DMNRNFQRDRQRKDSRRVRNNKRKKKCKKQKYRDYYIDKSGCRSKRPYKMAKCVSDTSDS
CVAKKTKLRTIRFICQNGRKFNKEVEMIRKCGRIKQDKRKRI
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggagtgatgtgttgctttgtctatcgatttcgatctgtttgatacatcccatc
ttgtgctactgtcccagggaatgcaaatgttctagtgacggagtgattgactgctcacga
gccaacctcgacacatttccaagagacatccctttcaatgcacatacgatagatctcagc
cacaattcgatctcccaattccctgacctgtccgagtggctagagtactcacagatcaag
aaccttgatgtttctcataactcgatccaatgcttcgacagccaattcattggatcaaag
gttgagcatgtggatttgcgatacaatcggctccaaagcttgagggtcgacaaatctttg
gaagacctcaaagtcagaattaatgacgacgaaaccctgaacaattgccaatgtgcgaag
gaatcgctccacaaattcagtggggtgtcttgtagcgagtcctacttctcaccacacgcc
attctctgtggaacatcttctgacgatgtcgtgccaggagaaagtatttgcttggaacaa
gaagcgatgtgtcccaaagactgtcattgcaatgatgggatagtggattgccgggacaag
aaattggatcgattcccctcgtcaatccctcacagtgctactgaattgcgtttggaacaa
aataacattggatccatccccaaaaatgcgttcgccaagttgaagtggctacgacgaatt
gacttaagcaacaacgaaatacgagtcattcctgatgacactttcaatgggcttccaagg
ttgacctcgttggttttgtatggaaatcaaatcgaaagaatatcgggctctagtttctat
gaccttcccgccctccagctcctactattgaattcgaataagatccgatgcatccatcca
aatgctttcaaccgattggaagttcttcatttgttatctttgtacgacaacaacatccaa
accttgagcaatggaacttttgatggactggaaaaccttcaaaccttacacttgggcaaa
aactcatttgcctgcggttgcgatttggcctggctaacgacttggcttcagaaaaacccc
gtggaaacctctggcgctcgatgcgagacccccgtcaaattgcagcggaaaaagatttcg
acgctccatttggagcaatccaactgtttggatctttctggctctgccccatcttgcaat
tggacggctccttgtccttatccatgttcttgctcggatgggattgtggattgttcgggt
cgtggagtgaagattatcccttcagatctgcccaaaaccacgcgggaacttcaattgagt
ggcaacgtaatggatatcattccctcagtgggtctcttcaatttgctcccttccttgaac
acgctaaacatgagtcaaaacttcatcagtgtcatagaggaaggttcctttgaaggagca
agaacgataaccattttggatctctctcacaattcactttccaccattcgaggacggcta
ttgcggggtctagatggactaaccacgctctatttgcataacaacaacatccattgtatt
tctcctggcgctttcgatatgctgcccaagctttcgtttgcaaatatcttgagtaatcca
attcaatgtgattgtcacatggcttggtttggagattggttgaggagccaaaacaatacc
tcggccgtggccacttgtgccacacccactcatttgaaaaaccgacaactccaagatctg
ccattaccctccttcaggtgtaaaggctctgcagatgaaggatgtttggaacaacattac
tgtccaagggaatgtgtttgcacgggaactgtcattcgatgcagccatgcacaactgaag
cacgtgccaaataatgtacccaaagaggcatctgagctctatcttgatgtcaatgacatc
acagatttgaagatggaacaattcagccatttgcagcgcctctccagattggacatcagt
aacaacaaaatatcggtcatcaagccatacgtgtttgctaatctcacccgactgtctacg
ttgataatcagctacaatgaaattaagtgtatccaaccacgagccttcagtggattgcat
catctgagaattctatcccttcatggaaattccatttccatgatcccgaaaagtgccttc
gacgatcagaacagcatcactcacttagctcttggatctaatccgcttttgtgtgattgc
aacttgaaatggctctcacaatggatgaaaagtcaatacatcgagccgggtattgcaaag
tgctctcatcccaactccttggccaaccatttggttctgactacccctgagagtagcttc
aaatgtcaggacgaaactcctcaagatattctggccaaatgcgacccctgtcacagggct
ccatgccaaaataatgcctcttgtaaagcccaacatggcctagacttcatttgcgattgc
gttcctgggtactatggaaccttttgtgagaagaatattgacgcctgctacgggaaccca
tgttcgcacgatggcacatgcactgttatggaacacggaagattcgaatgtaattgccct
ctcggatattctggattgcgatgtgaatttgacatcaatgagtgcgccagtagcccttgc
caaaatgatgccaaatgcatcgatcaaatcgggagtttcgcttgcgattgcaaagagggt
ttcaccggggacctttgccacaaagaaatcgacccttgtgaggatgcccaagaaaagtgc
ctcaatgaagggacatgtgtgcccagtaagagtacgttttcttgcgtttgccaacctgga
ttcagcggaccagattgttccatatccttgaacgattgtcgaagtcacatgtgtcaaaat
ggcggaacttgcctcgatggtaatggaacttacagttgtgtttgcacccccgagtttgcc
ggcaagtattgcgaattggaacccatcattagccacctctacccccaatcatcgccctgt
caacaacatgaatgtaaacatggaacatgcttcatgcccaaggattccaaggattacgtt
tgcaagtgtgattcgggatacacaggcaaatattgcgaatatcttacaagtttgagcttc
gatcaaaaaggagcatatgcccaaatggaaccgctaaatacgcagccgtttgccaatgtt
accatggaagtgatcaccttggaaacgagtggaatcttgatctacgttggccaaaacgaa
catctagctgtggagctattcaaggggcggatccgagtgtcgtatgatgttgggaattat
cccgtgagcacaatgttcagttacgagaatatctctgatgggcttcgacatcgaattcaa
atcctggctcatggcaagaatctaactctccaagttgatcaaggccagtcccgatccatt
gtcaacgagggagccaactcggaggttcaattccgaacccctctttacgtggcagggtgc
ccagataatgtgggagaagaagcgctaaaacattggcacctgagaaatatctccagtttc
caaggttgcatgccttctctccacatcaatgacaaattggtggacttccttcaagctgct
gatgttcgtcacaaggtctctcctggatgttccatgtcagaattggtccaaaatgctgag
ccagaagatccgtgttctccatccccttgcaagcatggaacttgttcgcccattgaagca
atccctggcttccagtgtacctgcaaacaaggttttagcggtgtctattgcaatcaaaaa
gatatgaatcgaaacttccaaagggatcgacagcgcaaagactctcgacgcgttcgaaac
aacaaacggaagaagaagtgcaagaaacaaaaatatagagactactacatcgacaagagc
ggctgccgatccaagaggccttacaaaatggccaagtgtgtttcagatacctcggactcg
tgtgtggcgaagaagacaaagttgcgaaccattcgctttatttgccaaaacgggcgcaag
ttcaacaaagaagtggaaatgatccgcaaatgtggcagaatcaagcaagacaagagaaag
cgtatttag
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