Tigriopus californicus (tidepool copepod): 131881075
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Entry
131881075 CDS
T09700
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131881075
03009 Ribosome biogenesis [BR:
tcf03009
]
131881075
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
131881075
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131881075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Inhibitor_I29
Motif
Other DBs
NCBI-GeneID:
131881075
NCBI-ProteinID:
XP_059083817
LinkDB
All DBs
Position
5:15234784..15236915
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AA seq
632 aa
AA seq
DB search
MTTATQGQMKTSPKSKPKKPTKASPKSDKSDSKKMGQKFEKKTDQKPKKLHSKTGAKKEA
PEKKIKRKVSETSSEVPVKKIKKPEGLDALAQPATPLDKKKERQKQKALKAERQKKAKTE
DLYALGVEAKKIWEKVRTDKCPMEEKVQLLPQLHALMKGQLSKLVYSHDTVRVVETLITT
GDEAVRAMILEELKPELLKMVKTQYAGFLVNKMLKYGTKAQRKQIFQMFESHVAELAKHK
FANQTLELYYNDFASTPERQGVLQEFCGPEFRKLKDPGVATVQALLTKHPEKAKFVKQHL
HEVVNVLIAKGCYNLGLVHRVIYEYLTVCTPEQRTDLVNQLRDVCVHMVHTEYGKRLTVE
AVKYGTTKDRKAIVKSFKGFVVKTCCEDMGYVGILAICDAVDDTKLVGKAILGEMIEAID
ELVASGSGRKVLMYLVAARNTTYISKDVIDLLETDTETSKKDPAIRAAELRALISPALVK
YVLTNMTELLKDNGKVVFLTCLLNYADGMAPCMSQLAEEAAKPFTSHDDDASLVEAKASH
MMLKKLISRDKERYAQDPSQTQNLFSLMLLKAMDEDSWDSFLNCNRGCFLLVNMLETEIE
EIREQVQTKMKTFKKTLQKQKTNGAEILRKKL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccacccagggccagatgaagactagccccaagtcgaagcccaagaaaccg
accaaggccagccccaagtctgacaagtccgactcgaaaaaaatgggccagaaatttgag
aagaagaccgatcagaagccgaagaagttgcactcgaaaacgggagcgaagaaagaagcc
cctgagaagaagatcaaacgcaaagtaagcgaaacttcctccgaagtgcccgtcaaaaag
ataaagaaacccgaaggcttggacgcccttgcccaacccgccacgccactggacaagaag
aaggaacgccagaaacagaaggccctcaaagccgaacgccagaaaaaggccaaaaccgag
gatctctatgctctaggggtcgaagccaagaagatttgggaaaaggtccgaaccgataaa
tgtcccatggaggaaaaggtccagcttttaccccagctccacgccctcatgaaaggccaa
ctctccaagttggtctactcccacgacacagtccgtgtggtcgagaccctgatcaccacc
ggggacgaggccgtccgagccatgatcctggaggagctcaagcccgaacttctcaagatg
gttaagacccaatacgccgggtttctggtcaataagatgctgaaatacggcaccaaggca
caacgcaagcaaatcttccaaatgttcgagagccacgtggccgaattggccaagcacaag
ttcgccaaccagaccttggagttgtactacaacgactttgcatccaccccagagcgtcaa
ggtgtgttacaagagttctgcggacccgaattccggaaattgaaggacccgggagtggcc
acggtccaagcccttttgaccaagcatcccgaaaaggccaagttcgtcaagcagcacttg
cacgaagtggtcaatgtgctcatcgccaaaggctgctacaatctcggtctggtccatcgc
gtcatctacgagtacttgaccgtgtgcacgcccgaacagcgcaccgatctggtcaaccag
ctccgcgacgtctgcgtccacatggtgcataccgagtacggtaagcgactgaccgtggag
gccgtcaagtacggcaccaccaaggaccgcaaagccatcgtcaagagcttcaagggcttt
gtcgtcaagacctgttgcgaagacatgggttatgtcggcatactggccatctgcgacgcg
gtggacgatacgaaattggtcggcaaggccattctgggcgagatgattgaggccattgac
gaactggtggccagtggatccggacggaaagtgctcatgtatctggtggctgcccgcaac
accacttacatcagcaaagacgtgattgatcttttggaaaccgacacggaaacgtccaag
aaggatccggctattcgcgctgctgaattgcgagccctaatctcccccgccttggtcaag
tatgttctgaccaacatgaccgagctcctcaaggataacggtaaagtggtgttcctgacg
tgtttattgaattatgccgacggaatggcaccctgcatgtctcaattggctgaggaagcg
gccaagccgttcacttctcacgatgatgatgccagtttggtggaagccaaggccagccat
atgatgttgaagaaattgatctcacgggataaggaacgatatgctcaagacccctcgcaa
acgcagaacttgttcagtctgatgctgttgaaggccatggatgaggattcttgggacagt
ttcttgaactgtaaccgcggttgcttcttattggtcaatatgttggagacggagattgaa
gagatacgcgagcaagtccaaaccaagatgaagaccttcaaaaagaccctacaaaagcag
aagacgaacggggccgaaatcttgcgcaagaagctctag
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