Tigriopus californicus (tidepool copepod): 131881290
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Entry
131881290 CDS
T09700
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131881290
00071 Fatty acid degradation
131881290
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131881290
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131881290
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131881290
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
131881290
NCBI-ProteinID:
XP_059084101
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Position
5:8030607..8034966
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AA seq
841 aa
AA seq
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MSKMRKARATSLKEPASRKASGMAHLLSALHQNAAAVVNSKSQLNGPDQVLISESFSTTR
RNESVKVRHEDQGLGSEEPISIPTMFRDIYEAYPDTVALRAKCEGKLKEWTYEQYYEEVR
VVARAFIHLGLHRHHSVAIMGANSPESVIANLGAIFAGGISMGLQRQLCSDDIAKIAIDA
KADVIVVENEAILKRILLIQHKLPELRAIIQIQGEPSLSDKRRLHRTHKKHILSWTQALD
IGKETNEGHLDDRLIRVAINQCCTLVYTSGASGGPKGIMLSHDNLTWSSKMLLGVLRAPG
FNRLPSPGEEIILSLLPASSVTAHILDIYYTMSIAGTLCFYDEDILNDMSSFFDAVATIQ
PTVFCASPHIYERIYQRFRENRRQMSGFQKLFLDWSSSTVRMKHVRGRIPNQTANSGILN
QWQTAMAKNTVCKKHKEALGFQARTVFLSIGEPMCKEILTFLAGYDIVIHEMYGYPETCG
LLSANIPKRYCKLGTSGKAVPGVKVKLIPTQVVQPLIDDDHTEAGEIATWGRHIFMGYLN
RDGDTKDCLTSDDWLKFGVAGLMDTDDFLLVQGKPSDWIRLKSGELISPQRIEQLVRLEI
PSVQHVVLVGNGETHLAALLTLQTKIEEVSQTPTKELSEEAKRWCRHAKYDLHFVAEVVE
KLELGLQHAFQAGIDRANLGASSLSHTIGDWRLIPEAFKYQTGELGLGMELIRPNVMENN
ITCIRSLFIHEGTVCSNDQSNLLQIQVTLSPQLSQIKEEDESKASSRTSIDRLRDEVVVI
AKREQDTNEIETVEVHYDGEITESSETSDASSKSSFGRKISDSLNNNELSNDIVKARITR
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatgaggaaagctcgggccacctccttaaaggagccggcctctcgaaaggcc
tcgggtatggcccatcttctcagtgctttacatcaaaatgccgcagccgtggtcaactcg
aaatcccaactcaatggacctgatcaggtgctcatttccgagagtttcagcaccactcga
cgcaacgaaagcgtcaaagtgcgtcatgaagatcaaggactgggctcggaggaacccatt
tctatccccaccatgttcagagatatctacgaggcctatcctgataccgtggcgcttcga
gccaaatgcgagggcaaattaaaggagtggacctatgagcagtactacgaagaggtcagg
gtcgtggcaagagccttcattcatcttggtcttcatcgacaccattccgtagcgatcatg
ggggccaattctccggaatcggtcattgccaacttgggtgctattttcgcaggcgggatc
tccatgggacttcaacgccaattatgttcggatgacattgccaaaatcgcgatcgatgcc
aaggcggatgtcattgtggtggagaatgaggccatcttgaagcgaatcctcttgatccag
cacaaacttcccgagcttcgagccatcatacaaattcagggtgagccatcgctctcagac
aaacgcaggcttcatcgcacacacaaaaagcatatcttgtcgtggactcaggctttggat
attgggaaggaaaccaacgaagggcatttggacgaccggctcatccgagtagccatcaac
caatgttgcacactggtttacacgtcgggcgcatcgggaggtccgaaagggatcatgctc
tcgcatgataatctcacatggtcatccaaaatgctcttaggcgtgctgcgagctccgggt
tttaaccgacttccatcgcctggggaggagatcattctcagcttgttgccggcttcgtcc
gttaccgctcatatcctggatatctattacaccatgagcattgccggtacactttgcttt
tacgacgaagacatattgaacgacatgagctcgttctttgacgccgttgccaccatccag
cccactgttttctgtgcctcaccccacatttacgagcgtatttaccaacgcttccgagag
aatcgccgacaaatgtccggctttcaaaaactcttcttggattggtccagtagtacagtc
cggatgaaacatgtgcgaggtcggattcccaaccagacggccaactcgggcattctcaac
caatggcaaacggccatggctaagaacacggtttgcaagaaacacaaagaggccttggga
tttcaagctcgaacggtgtttctgtcgattggtgaaccaatgtgcaaggagatcctcacc
tttttggcaggctatgatattgtcatacacgagatgtatggatatcccgagacttgtgga
ctcctatcggctaacatcccgaaaaggtattgcaaattggggacatctggcaaggctgtt
cctggggtaaaagtgaaactgattcctactcaagtggtccagccgttgattgacgatgat
cataccgaagctggagagattgcgacctgggggcgccatatctttatgggctacctaaat
cgagacggagatacgaaagattgcttaacttcggacgattggctcaagtttggcgtggct
ggattaatggacacggacgactttcttttggtgcaagggaaaccctcggactggattcga
ctcaaaagcggcgaactcatttcccctcagaggatagagcaacttgtccgattggaaatt
ccgtcggtgcagcacgtggtcttagtcggaaatggtgaaacccatctggctgctttactt
acactccagaccaaaatcgaggaggtttctcaaaccccgacaaaagagctctcggaggaa
gccaagagatggtgtcgacatgccaagtacgatctccatttcgtggccgaagtggtcgaa
aagctcgagcttggacttcagcacgcattccaagcgggaattgatcgggctaatctcggt
gcttcgtctctgtcacacacgattggagattggagactaattcctgaggcttttaagtat
cagactggcgaactcggactgggaatggaattgattcgcccaaacgtcatggaaaacaat
atcacatgcattcgctcgcttttcattcatgagggaaccgtatgttccaatgaccaatca
aatttgcttcaaattcaagtcacattgagccctcagttatcgcagatcaaggaggaagac
gagagcaaggcctcctcgcgaacctcgatcgatcgtttgcgcgatgaagtcgtggtcatc
gccaaacgagagcaagacacgaacgagattgaaacggtggaagtgcactatgacggagaa
atcaccgaatcctcagagacaagcgatgcatcgtctaaaagctcatttgggaggaaaatc
tcagattcgctcaataacaacgaactgtcaaacgatatcgtgaaggcgagaatcacgagg
aagtag
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