Tigriopus californicus (tidepool copepod): 131881366
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Entry
131881366 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like
KO
K25192
E3 ubiquitin-protein ligase RNF157 [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131881366
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131881366
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131881366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
DNA_pol_E_B
Nop14
Motif
Other DBs
NCBI-GeneID:
131881366
NCBI-ProteinID:
XP_059084192
LinkDB
All DBs
Position
5:complement(6253703..6256295)
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AA seq
692 aa
AA seq
DB search
MGQTWSRSGRDHRREGDPDPSGVSGGGQHYRYPGKHGHPFFASHFIMGGEKFDSPQPESF
LFGENQDLNLLGGRAVSFPYPPPAANEATKTLKSQINIRKDSVHLVLVPSSGDTSQTEAT
PLPPLPETPSESETDAENPPLRLMVESAAASKKRYRVQFTFDSDVRCEITIYYFCREENH
AQGVTYVPKRSTLRSPTYTYNRGAAQVFNQADHLFCPADCQDELFLAAEDPELLGVAIQC
VSLEGETPRTSHATVASIEANADATHFIIKNLKQKLFVDGLSYLLQEIYGLENKSLDVNQ
HSDDDDDDCGAECVVCMCDLRDTIILPCRHLCLCNACADSLRYQANNCPICRAPFRALLQ
IRAVQKIGQVTHPALPDPDQSQEGVPPGYQCVSLVEALNGPVNMSSAPSSQTAVTATTGK
SPDKAVTSKSRKGSRTGRRSSAPRSASGEGRAHSPPRIESEAMTAEGEAETLSSGETAAT
TKIPPKLCIESEVTLRKSPSKRSFKGDASNPSLDLVDEELANMSLGQSSLQTKDNAGPQP
LIQDIEDEEIEEGEEEEEDVHQKMLAQPEDVDDDDEDDDFDDAEDDVQVEGLDNYVDNDD
AVVVNIASTKPIRLSAPGTPTSSVSFRSSQDSSSSSSSSSTKQLLPTTTTIAVAGPTPSS
GVTRSRPNVVVKLSRGQNPEEDREGDEEDEFV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacctggagtcgaagcggtcgtgatcatcgacgcgaaggggatccggacccc
agtggcgtgtcgggcggtgggcagcactaccgttacccgggcaaacacggccatcccttc
ttcgcttcacattttatcatgggcggtgagaaattcgattcgccccaacccgagtcgttt
ctcttcggcgagaaccaggatctcaatctcttgggtgggcgggctgtgtcgtttccgtac
ccgcccccggcggccaacgaggccaccaaaacgctgaaaagtcagatcaatatccgaaaa
gactcggttcacttggttttggtgccttcgagtggggacacgagtcagaccgaagccacg
cccctgccgcccttgccggaaacgcccagtgagtcggagaccgatgccgagaatccgccc
ttacggctgatggtggagtcggcggccgcgagtaagaagcgatatcgcgttcagttcacg
ttcgattcggacgtgcgatgcgagatcaccatctattatttttgtcgggaggagaatcac
gcccagggcgtgacttacgtacccaaaaggagcacgcttcgctcgcccacttatacttac
aatcgaggggcggctcaagttttcaatcaggccgatcatttgttttgtccggccgattgc
caagacgagctttttttggccgctgaagatcccgaactcttgggtgtggccatccagtgc
gtctcattagagggtgagacgcctcgtacctctcatgccactgtggcttccattgaggct
aatgccgatgccacgcacttcatcatcaagaatctcaagcaaaagttgttcgtggacgga
ttgagctacttgctccaagagatctacgggttggagaataagagtctggatgtgaatcag
cattcggatgacgacgatgacgattgtggggcggaatgcgtggtttgcatgtgcgacttg
cgtgacacgatcattttgccctgtcgtcacttgtgtttgtgcaatgcgtgtgctgatagc
ttgcgttatcaggccaacaactgcccgatttgtcgggctccttttcgcgctttgctccag
atccgagccgtccagaagatcggtcaagtcactcatccagccttgcccgatccagatcaa
tctcaggagggcgtgccacccggttaccaatgtgtgagtctcgttgaagccctgaatgga
ccggtcaatatgtcatcggccccgtcttcccagacagccgtaacagccaccacgggcaag
tcccccgacaaggctgtgacctcgaaatcacggaagggcagtcgaacggggcgacggtct
tccgctccacggtctgcctcgggggaaggtcgagcccactcaccacccaggattgaatct
gaggctatgaccgctgaaggtgaggctgaaactctgtcttccggcgaaacagccgcgacg
acaaagataccacccaaactttgcattgaaagtgaggtcacgcttcgaaagtctccttcc
aaacggagcttcaagggtgatgcctctaatccatccttggatctagtggatgaagagctg
gctaacatgagcctgggacaaagttcactgcaaaccaaagacaacgcaggtcctcagcct
ttgatccaagatattgaagatgaagaaatcgaggagggggaggaggaggaggaagacgta
catcaaaagatgttggcccaaccggaagacgtggacgacgacgatgaggatgatgatttt
gacgacgccgaagacgatgtccaagtcgaaggtctggataattacgtggacaatgacgat
gcggtggtcgtgaatattgcctccaccaagcctatacgattgtcagcacctggaacacca
acgtcctcggtcagtttcaggtcctctcaggacagttcgtcctcgtcctcatcttcctcc
acgaaacaactacttcccacgactacaactatcgcagttgctggacccacaccatcttca
ggagttactcgaagtcgcccgaatgttgtcgtgaagttgagccggggacagaatcccgaa
gaggatagggaaggtgatgaagaggacgaatttgtttaa
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