Tigriopus californicus (tidepool copepod): 131881438
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Entry
131881438 CDS
T09700
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131881438
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131881438
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
131881438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
SWI2_SNF2
IstB_IS21
Helicase_PWI
Cas3-like_C_2
NACHT
Motif
Other DBs
NCBI-GeneID:
131881438
NCBI-ProteinID:
XP_059084275
LinkDB
All DBs
Position
5:complement(9111013..9125955)
Genome browser
AA seq
2239 aa
AA seq
DB search
MGYPDRSPPPRLSGYLRRFGHVSHAHERWIHVSDQDTGVADEARAEPLQQRRRQANQPAR
YRDDCDIGSPSSWIWSEVQALGLSAANASRVRGFVREALGDDLGSTVLDEASVEVLSMTL
PQAEFTLHFHGQLKTLLGPLSLEQGRELHTLVHQSVSDLKPDRLSSLQRYLTSREFVAKK
GCHRAVFGENLAFESVLDRRLVGPRDWDALVQVTDEAYNLRRDITFELRSGAQGLLASEG
PVLQFDLAWLESILETAFGPKHPTGLSLNELVQALIEILGSARSSDELQTEMFEWIGFDH
FELIQQLLEHRSELTRSHRESLGNMRQEIISAAARAQPHLIAPEMAMPTYGCQVMVQSEE
ERQMKKQARKEEKKIQRILNKLDGEGDHFETRDPTSMFDPVDLRTKRQAALTNAQMQPLF
KESKELRDGMAVEPKLPFVFDSLAQTKSAAGFVQGVKLQLPSGFERKDEKKFEEYTLPAV
GASPVSTGKDLVPVSSLDEIGQVTFKGIQHLNRIQSVVFDSAYHTNQNLLVCAPTGAGKT
NVAMLCITQAIRQNIVNGVIKKDAFKIVYVAPMKALAAEMTGSFGKRLAPLGIAVRELTG
DMQLTKTEIMNTQMLVTTPEKWDVVTRKPGDVSLTQLVRLIIIDEVHLLHGDRGPVVETL
VARTLRLVESSQTVIRVVGLSATLPNYIDVSNFLGVSPRSGLFFFDGRFRPVPLAQTFVG
IKDYRVMQQMNDMNELCYDKVIEFLKKDKQVMIFVHARNATVKTGMLMRELAQNKGQTSL
FEPPSSSHLGQARNSVLKSRNKQLRELFEGGIGFHHAGMLRTDRNLVEKFFSQGLIKVLV
CTATLAWGVNLPAHGVIIKGTEIYDSKRGAFVDLGILDVLQIFGRAGRPQFDKSGHGIIL
TTHDKLSHYLSLMTNQFPIESNFIVLIADNLNAEISLGTVTNIEEGVKWLSYTYLYVRMK
KNPLVYGISYQELRDDPLLEIKRRDIITDAAKRLDKAKMIRFDERTGYLHATDLGRTASH
FYIKYDTVEVFNELIRPIMNEADILAMVSQAQEFEQLKVRDDEMDELDDLTHVNCEVPVS
GGSENVHGKVNILIQTYISRGRVNSFSLISDMNYVVTNASRIVRALFEIVLRKNWPLLAG
RVLKFAKTIEKQMWDFENPLKQHPSLKPDILSKLEHRNFTLDRLRDMDGKEIGHLLHHIK
AGGEVKKAAFEIPLIELEATIQPITRTVLRVRLNITPNFRWNDRIHGISSEPFWLWVEDP
ENNHIYHHEYVLLSKKQVKINETQEVVFTIPIFEPLPTQYYIRAISDRWIGSENYTAISF
KHLILPERHTPPTDLLDLQPLPVSALNDKQFEMLYKFSHFNAIQTQIFHTLYHSDRNVLL
GAPTGSGKTIVAEIAMLKVFRDFPKAKVVYIAPMKALVRERMEDWKRRLEGTLRKKVVEL
TGDVTPDMRAIQESSVIVTTPEKWDGVSRSWQTRNYVQEVALIIIDEIHLLGEDRGPVLE
VIVSRTNFISSHTSRNLRIIGLSTALANARDLADWLGIGENGLYNFRPSVRPVPLEVHIS
GFPGKHYCPRMATMNRPAFQAIQQHSPTKPSLIFVASRRQTRATAFDLISSVSEQNDPRM
WVHMPENEMERVVQSIKDQNLRHTLAFGIGLHHAGLVERDRKTVEELYVNQKIQVLIATA
TVAWGVNFPTHLVIVKGTEYFDGKLKRYVDMPITDVLQMMGRAGRPQYDDKGVACVFVHD
VKKHFYKKFLYEPFPVESSLHSVLPDHLNAEIVAGTIQTKQDALDYITWTYFFRRLIQNP
TYYGLEGVDETNLNHFLTETIDGALYTLESSCCIEIDDDGKGIQSTVLGRIASYYYLSHE
TIGQFNNELSPEMQTEELLKVLCDSKEYSELPVRHNEDQMNTELAKLCPITLNPYDMDSP
HQKTHLLLQSHFCRNLLPIQDYHTDTKSVMDQAIRILQAMIDVVADLGWLKTTLQIQVLL
QMVIQGRWHTDSSLMCLPNVDSHEASLFARIKNDHSSPIQSLPEILHSLGDRESVASVLR
SDLCESEISDIFQAIDQFPQMHPRLSICSIGGTKHIINLCDEASNSHVKQAWIKVGLDKE
YRLSVDLQRNNKFLHRDGKAFAPKFPKPKDEGWFLVLGCIDDKELVALKRVGSSNGGRKK
NGSDQHQLTFFTPEKPSKMVYTLFIMSDCYLGLDQQYALHLDVVEECQNIENEEDTDFED
DEARFALLREEKTRIEQNL
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgggttatcccgaccgctcaccaccgcctcgattgagcggctatttgcgccgttttggc
catgtgagtcacgcccatgagcgatggatccacgtgtccgatcaggacacaggtgtggct
gacgaggcccgtgctgagcctttgcaacaacgtcgtcgtcaagccaaccaaccggccaga
tatcgcgatgattgcgatattggaagtccgtcgtcttggatttggtctgaggtgcaggcc
ctcggcctgagtgcagctaatgctagccgagtgcgtggctttgtgcgggaagctctaggc
gacgaccttggttcaactgtgttagatgaggcgtccgtcgaagtcctgagcatgacgctt
cctcaagctgaattcactcttcatttccatggccaactcaaaactctcctaggcccgctc
agcttggaacaaggccgggagctccacaccttggtccaccaaagcgtgtcagatctcaag
ccagaccgcctctcttcactacaaagatacctgacgtctcgagaatttgtcgcgaagaaa
ggctgtcatcgtgcggtttttggcgaaaacttggcgtttgaatctgtccttgaccggcgt
ctggttgggcctcgagattgggacgccctggttcaggtgacggatgaggcttacaatttg
cggcgcgacatcactttcgaactgaggtcaggtgctcaaggtttattagcgtctgaaggt
cccgttcttcaatttgacttggcttggttggaaagcatcttggaaactgcgtttggcccc
aagcatcccactgggttgtcgttgaacgagttagtgcaagccctgattgaaatcctcggc
tcagcccgctcttctgatgaattgcagactgagatgttcgaatggataggcttcgatcac
tttgaactgatacagcaactcttggagcatcgaagcgaacttactcgttcccatcgggaa
agtttgggtaacatgcgccaggaaatcatttctgcagcggctagggcccaaccgcacctt
attgcacctgaaatggccatgcccacttatggctgtcaagtaatggttcaatcggaggaa
gaacggcagatgaagaaacaagcgcggaaggaggagaaaaaaattcaaagaattctcaac
aaacttgacggcgagggagaccattttgagacccgtgatccaacttctatgttcgacccg
gtagatctacgcaccaaacgtcaagcagctttaactaatgctcaaatgcagcctcttttc
aaagaatcgaaagagctgagggatggcatggctgtagaaccaaagctaccttttgtattt
gacagcttggctcaaaccaaatccgcagcggggtttgttcaaggtgtgaaattgcaactt
ccatccggatttgagcggaaagatgaaaaaaagttcgaggagtacacattgcccgcagta
ggcgcttctccagtgagcaccgggaaggatctcgttccggtttcgtccctcgatgagatt
ggacaagtcactttcaaaggaattcagcatttgaatcgaattcaatccgttgtttttgac
tctgcctatcacacaaatcagaaccttttagtatgcgcgccaactggggcaggcaagacc
aatgtagcaatgctgtgtattactcaagccatcagacaaaatatcgtgaatggtgtcata
aaaaaagatgcctttaaaattgtctacgtggcaccgatgaaagctttggccgctgagatg
actggaagttttggcaagcggttagctccactgggaattgctgttcgtgagttaactggc
gacatgcagcttaccaaaaccgaaataatgaatacacaaatgttagtaactacccctgag
aaatgggacgtggtgacacgaaaacctggtgacgtatcactcacgcaactggtaagactc
ataattattgacgaagtccatcttcttcatggggatcgtggaccggtcgtggaaactttg
gtggccagaacattgcgactagtagaaagctctcaaacggtgatacgcgtggttggactc
tcggccacattacctaattacattgacgtatctaacttcctcggggttagccccagatca
gggttatttttcttcgacggccgttttcgtccagttcccttggcgcagacttttgtgggt
atcaaagattaccgcgtgatgcaacaaatgaacgacatgaacgaattatgttacgacaag
gtcatcgagttcctcaaaaaggataagcaggtcatgatcttcgttcatgcgcggaatgct
acggtgaaaacagggatgctgatgcgagaattggctcaaaataagggacagacctcattg
tttgagccccccagttcttcccatttgggccaggcccgcaattcggtgctcaaatctcga
aacaaacaattgcgagagctcttcgaaggcggtattgggtttcatcatgcgggtatgttg
cgaacagatcgcaacctggtggaaaagttctttagtcaaggtctgatcaaagtacttgtt
tgtactgctaccttggcatggggtgtaaatttgcccgcacacggcgtcatcatcaaggga
acagaaatctatgattccaagcgaggtgcatttgtagatctgggcatattagatgtactg
cagatctttggtcgtgccggccgtcctcaatttgataagtccggccacggaattatattg
accactcacgataagctcagccattacctgtcactgatgaccaatcagttccccatcgaa
tccaacttcattgtcttaatcgcagacaatttgaacgccgaaatctccctaggcacggta
accaatatcgaggaaggagtcaaatggctatcctatacgtatttgtatgtgaggatgaag
aaaaatccccttgtttacggaatcagttatcaagagcttagagatgaccccctcctcgaa
attaagcgccgtgatatcataacggatgcagcaaaacgtcttgacaaggcaaaaatgatt
cgctttgacgagcgcactggatatcttcacgccactgatctgggccgcaccgcctcccat
ttctacatcaaatacgacaccgttgaagtgttcaatgagctcattagacctatcatgaac
gaagcagatattttagcgatggtttcgcaagctcaagaatttgagcagttgaaggttcgg
gacgatgaaatggacgagctggatgatctcacccatgtcaattgtgaagtacccgtttct
ggaggctcggaaaatgttcatgggaaggtcaacatcttgatccagacttacatatcaagg
ggacgtgttaattcgttttcattgatatctgacatgaattatgttgtcactaatgccagt
cgaattgttcgagcactctttgagattgtcctgcggaaaaattggccccttttggctgga
cgagtattgaaatttgctaaaacgatcgaaaaacaaatgtgggattttgagaatccctta
aagcaacatccgtcgctcaagcccgatatcttgagcaaactggagcaccgcaattttact
ctagatcggctgcgagatatggatggaaaggagataggacatctgttgcatcacatcaaa
gccggtggggaggtaaagaaagcggcttttgagattccattgattgagctggaagcgacc
attcaaccaattacccgtactgtcttgagagtgcgcttgaacatcactccaaacttccgg
tggaatgatcgaatccatggaatatcttctgagccattttggttgtgggtcgaggaccca
gagaacaatcacatttatcatcacgaatacgtcctgctctcgaaaaagcaagttaagata
aatgaaacccaagaagtggtgttcacgattcccatcttcgagcccctgccaacccagtac
tacatccgggccatctcggatcgctggattggaagtgagaattatacggctatctcgttt
aagcatctgatcttgcctgagcgacacactcctcccacggaccttttggatcttcagccg
cttcccgtgtctgctctaaacgacaagcagttcgaaatgctatacaaattctctcatttc
aacgccattcaaacgcaaatatttcacacgctttaccactctgaccgaaatgtgcttttg
ggcgcccctacaggatcaggaaagacgatcgtcgctgaaattgccatgttgaaggtgttc
agagactttcccaaagccaaagttgtttacattgctcccatgaaggctcttgtccgcgaa
agaatggaagattggaaaaggcgtttggagggtactctgaggaagaaagtagtcgagctc
acgggagatgtaactccggacatgcgagctattcaagagtcaagcgtaatcgtaaccact
cctgaaaaatgggatggagtatctcgatcttggcagactagaaattatgttcaggaagtg
gccttgatcattattgacgagatccacctattgggcgaagatcgtggaccggtccttgaa
gtgatcgtctcccgcaccaacttcatatcctctcacacgagccgaaacttaagaatcatt
ggtctttccacagcccttgccaatgcacgtgatctagccgattggctgggcatcggtgaa
aacggtttatataactttcgaccttcagttcgacccgttccacttgaggtgcacatctcg
ggctttccaggcaaacattattgtccccgaatggctaccatgaatcgaccggcttttcag
gccattcaacaacactctccaacaaagccttccttaatctttgttgcttcacgtcgtcag
acacgtgccacggcttttgatttgatatctagtgtatctgagcaaaacgatccgcgcatg
tgggtgcacatgcctgaaaatgaaatggagagagtggtccaatccatcaaagaccaaaat
ttgcgacatacacttgcgtttggaattggattgcatcatgcaggattggttgagcgtgac
cggaaaacagtagaggagctctatgttaaccagaaaatccaagtgcttatcgctaccgcc
accgtggcttggggtgtgaacttcccaacgcatttggtcatcgtcaaaggaaccgagtat
tttgacggaaaacttaagcgttacgtcgacatgccaatcacggacgttcttcaaatgatg
ggacgagcagggcgtccccagtatgacgataagggagtggcttgtgtctttgtgcatgat
gtcaagaagcacttttataagaagtttttgtacgagccatttccggttgagtcgagcctt
catagtgtgcttccagaccatttgaacgccgaaattgtggctggcaccattcaaactaag
caggatgccttagactacattacttggacgtacttttttcgaaggttgattcaaaatccc
acctattatggcttagaaggagtggatgagactaacttgaaccatttcctcacggaaacc
atcgatggagccctgtacaccctagaaagctcgtgctgcattgagattgacgatgatggg
aaaggcatccagtcaactgttttgggtcgtatcgcctcctactactacctctctcatgaa
acaattggccaattcaacaacgaactaagcccagaaatgcagaccgaagagcttctgaag
gtcctttgtgattcaaaggaatactcagaattgccagtgagacacaacgaagaccaaatg
aatacagagttagccaaactctgtcccattaccttgaacccctatgatatggacagtccc
catcagaaaactcatttgctcctccagagtcatttttgtcgaaacctgttgcccattcag
gattatcacacagatacgaagtcagtcatggaccaagccattcgaatcctacaagccatg
attgatgtggtagcggatttgggttggctcaagacaaccctacaaatacaagtgttactt
caaatggttattcaaggacgctggcacacggattcctccttgatgtgcttacccaacgtg
gatagccacgaagcctcgttgtttgcccgaattaaaaacgatcactcttctcctattcag
agtttaccggaaattcttcattccttaggtgatcgagagagcgtcgcctcagtacttcga
tcggatctttgtgagtctgagatttcagacattttccaagccatcgatcagtttccccaa
atgcacccacgattatctatttgctctatcgggggtacaaagcacatcatcaacctgtgt
gatgaagcctcgaattcgcatgtgaaacaggcctggattaaagtgggtctagacaaggaa
tatcggttatctgttgaccttcagaggaacaacaagtttttgcatcgtgacggcaaagca
tttgcacccaaatttcccaagcccaaggatgaaggctggttcttagtgctgggctgcatt
gatgacaaagaactagtggccttaaagcgggttggaagttcgaacggtggtaggaagaaa
aacggttccgatcaacatcaactcaccttttttacccccgagaagccgagcaagatggtc
tataccttgttcatcatgtcagattgttacttgggtttggatcagcaatacgctctccat
ttggacgtcgttgaagagtgtcaaaatattgagaacgaagaggataccgatttcgaggat
gacgaagctcgctttgctttacttcgagaagaaaaaaccagaattgagcaaaatttgtaa
DBGET
integrated database retrieval system
