Tigriopus californicus (tidepool copepod): 131881505
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Entry
131881505 CDS
T09700
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131881505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131881505
04121 Ubiquitin system [BR:
tcf04121
]
131881505
03036 Chromosome and associated proteins [BR:
tcf03036
]
131881505
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131881505
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131881505
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131881505
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131881505
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131881505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BRCT
zf-RING_6
BRCT_2
zf-RING_5
Ank_KRIT1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131881505
NCBI-ProteinID:
XP_059084373
LinkDB
All DBs
Position
6:8086760..8091974
Genome browser
AA seq
563 aa
AA seq
DB search
MMSTLTALSQLETLFHCDQCDSVMKGGVAFVLSQCRHSLCEACQSSFVGGNCPVGGCDRP
NHGKDIIKDRLMKERLEALLEMRQALESIENIGSHHDEPFAKTVSPHPPSLQSVPVLREI
KEKVTNQKVVKPKPKARSKAPAKIQQKRSILKAIPSEGANKSPSSETEENIRMAPPTKMP
SSKPERLLNKKNAKGETKLHVACIKGQVDEVKRLLDLGANPNTQDHAGWTPLHEVAQNGH
VEILRLLLDSGAAPNVPGTDNVTPLHDAVVSKDVQSVEILVKYGAKKDAINAKGQTPRDL
ASNEALRETIDRTECDMTASEQLETSLIHFAASAQDGQVKVLPLDLSAGEIVALKGAQSS
LGFKIDSKLNPSITHVLFTGSSDLAVDGNAVYYRALLSGKLLLRFNWLETSVKTGELVFD
EDDMETYLIKGTKTYPFGAPAKAWANGLQKLPELFDNCHFFFKGDFKPNDCYPDKSQLVG
IAQAGGGTVLTREPDPESIPANEQKIPFHADQNGPLAKCSHFIIYQEGRTLPKMRYNMPH
IKTLSLAWFFECINNFRLVDPFE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgactttgaccgcgttgtctcaattggaaacactctttcattgcgatcaatgc
gactctgttatgaaaggaggtgtggctttcgtgttgagtcaatgccgtcattctttgtgt
gaggcgtgtcaatcgagcttcgtgggcggtaactgtcccgtgggtggatgtgatcgaccc
aatcatggcaaggatattattaaggaccgtctcatgaaggaaagattggaggccttgttg
gaaatgcgtcaagccttagaatcgatcgaaaatatcggctcacatcacgatgagcccttc
gccaaaacggtcagtccacatccaccctcacttcaatccgttcccgttctccgggaaatc
aaggagaaggttacaaaccagaaggtcgtcaagccaaagcccaaggctagatctaaagcg
cccgcgaaaatccaacagaagcgttccattttaaaagctattccatcggaaggtgcgaat
aagtctccctcttcagaaactgaggaaaatatccggatggctcctccaacaaagatgccc
agctccaaacctgaacgtctactcaacaaaaagaatgccaaaggagaaacaaagctccac
gtggcttgtatcaaaggccaagtggatgaggtcaaacgtttgctggacctgggggccaac
cccaacactcaggatcatgcgggttggaccccgttgcacgaggtggcccaaaatggccat
gttgagattttgcgcttgcttttggatagtggagcggcgcccaatgtgcctggaaccgat
aatgtcactccacttcacgacgcagtagtctctaaagatgtccaatcggtggaaatattg
gtcaagtatggagctaaaaaagacgccatcaacgccaaaggccaaacccctcgtgattta
gcgtcgaatgaagcattacgagagacgattgaccgtaccgaatgtgatatgacggcttcc
gagcaactggaaacatccttgattcatttcgcggcctcggctcaagatggtcaagtcaag
gttttgcccctggatttgagtgctggcgaaattgtagccctcaaaggagcccaatcctca
ttgggattcaaaattgactccaaattgaacccaagcatcacacatgttctctttacggga
tcttcagatctggcagtggatggaaatgcagtctactacagagccctactctcaggcaaa
ttgctcctgcgcttcaattggttggaaaccagcgttaaaacgggtgaactggtcttcgat
gaagacgacatggagacctacctcatcaaaggcaccaagacctatccgtttggggctcca
gccaaagcatgggccaatggtctgcagaagttgcccgagctctttgacaactgccatttc
ttcttcaaaggtgatttcaagcccaatgattgttatccagataaatctcagttggttggc
attgcacaagccgggggtgggacagtcttgaccagagaaccagatccggaaagtattccc
gccaatgagcaaaagattccattccatgcggatcaaaatggtccgttggccaagtgctct
cattttatcatttaccaagaaggcaggactttgccaaagatgaggtacaatatgccccac
atcaagaccttgtctctggcttggttctttgaatgcatcaataactttcgacttgtggat
ccgttcgaatga
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