Tigriopus californicus (tidepool copepod): 131881508
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Entry
131881508 CDS
T09700
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00260
Glycine, serine and threonine metabolism
tcf00270
Cysteine and methionine metabolism
tcf00450
Selenocompound metabolism
tcf00670
One carbon pool by folate
tcf01100
Metabolic pathways
tcf01230
Biosynthesis of amino acids
Module
tcf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
131881508
00270 Cysteine and methionine metabolism
131881508
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
131881508
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
131881508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131881508
Enzymes [BR:
tcf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
131881508
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131881508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
131881508
NCBI-ProteinID:
XP_059084376
LinkDB
All DBs
Position
6:complement(8089138..8090627)
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AA seq
393 aa
AA seq
DB search
MSAFRPNDPSFSTKALHEGQEPEQWNSMAVVPHISMSTTFKQQGPADFKKYEYGRSGNPT
RDCLEACLASLDGAKYAVTFSSGLAATTSLTHLLNAGDHIVSMNDLYGGTNRYFRQVAAR
MNIETSFVDATDPQKIKEALRPNTKMVWVETPSNPTLKVTDIKAVADIVHAQPGVFLVVD
NTFESAYFQRPLELGADITYYSLTKYMNGHSDVIMGSIALNDSDLHDRIRFLQNAIGPVP
SPFDCYLVNRSLKTLNIRMEEHQKNALVVGEFLEKHPCVESIRHPGLPSHPQHDLVKKQQ
YGHSGMISFYLKGKLPESRKFLSQLQLVTLAESLGGYESLAELPYLMTHASIAEKERVAL
GVTENLIRVSVGLENPEDLIKDLDQALRFACDV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctttccgccccaacgatccgagcttctcgaccaaggcccttcacgaaggtcaa
gagcccgagcaatggaactctatggccgtggtgcctcatatctccatgtctaccacgttc
aagcaacagggaccggctgatttcaagaagtatgagtacggacgatcgggaaatcccacc
cgcgattgcttggaagcgtgcttggcgagtttggatggggctaagtatgccgtgaccttt
tcctcgggtttggctgccaccacttccttgacccacttgttgaatgctggagaccatatt
gtgtccatgaacgatttgtatggcggaaccaaccgatatttccggcaagtggcggccagg
atgaacatcgagacgtcttttgttgatgccactgacccccaaaagatcaaagaggctctg
cgacccaacaccaagatggtctgggtggagaccccgtccaatcctactttgaaagtgacc
gatatcaaggccgtggcagatattgtccacgctcaacctggagtgttcttggtggttgat
aacaccttcgagtcggcttatttccagcgacctctggagttgggggccgacatcacgtac
tattccttgaccaaatacatgaacggtcatagcgacgttatcatgggatcaatcgccttg
aacgattccgatctccacgatcggatcagattcctgcaaaatgccattggacccgtgcca
tcacccttcgattgctatctcgtgaaccggagtctgaaaaccttgaatatccgtatggag
gagcatcaaaagaatgccctcgtggttggagagttcctggaaaaacacccgtgcgtggaa
tccatccgtcatccgggtctgccgtctcatccccaacacgatttggtgaagaagcaacaa
tacggacactccggaatgatctcgttctacttgaagggtaaattgcccgaatcgcgaaag
ttcctgtctcaattgcaattggtgactctggcagagagtttgggcgggtacgaatctttg
gccgagctaccatatttaatgacccacgcctccattgctgaaaaggaacgagtggctttg
ggcgtcaccgagaatctcattcgagtatctgtgggtctggagaaccccgaggacctcatc
aaggatttggaccaggctcttcgattcgcttgcgatgtttga
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