Tigriopus californicus (tidepool copepod): 131881525
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Entry
131881525 CDS
T09700
Name
(RefSeq) probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00280
Valine, leucine and isoleucine degradation
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
131881525
Enzymes [BR:
tcf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
131881525
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Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
Motif
Other DBs
NCBI-GeneID:
131881525
NCBI-ProteinID:
XP_059084394
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All DBs
Position
6:12385169..12395325
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AA seq
765 aa
AA seq
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MLAFIRRPRRISSSTCVFWKANASSKPFPVLASQLTFDPSQIENGQKFNAMHEKRVEYCR
NGGGSKGVERHVKKNRKVLVWDRIEQILDEAAMDDFLEVGATVGIDLEYGDVPGGGTVTG
IGRINNTHVMLIANDATVKGGTSYPITVTKSLRAQEIAHNLRIPTLYIVDTGGAFLPLQS
EIFPDLKHGGRTFRNQAIMSGEGIPQIALVSGMCTAGGAYTPTMSDEAIMVNKIANIYLG
GPPLVKAATGEVVTGEQLGGARLHCETSGIADHFAETEAESFEIVRDIIATLNINENWPS
NAKPVDPPEGQAGDLIALSGFDKLNKDAIYSVVRCLLDGSRFTEFKKRFGPNLVTGFGFL
DGRLIGVLGNGGDITQQDAQKGAHFIQLCDQRSIPILFLQNSSNSGLETSYQDETILKER
AKMIRAQAVARVPKIALAVAPVCHDELMTMCGPSGNPEFNFMWPGSGLKKHGFECSQICD
SDPVDVSMGSAQYWSSRSTCDGIIRPQESRMVLAKAFYLSCLNFQARPGRNGEGNKAGDL
IALSGFDKLNKDAIYSVVRCLLDGSRFTEFKKRFGPNLVTGFGFLDGRLIGVLGNGGDIT
QQDAQKGAHFIQLCDQRSIPILFLQNSSNSGLETSYQDETILKERAKMIRAQAVARVPKI
ALAVAPVCHDELMTMCGPSGNPEFNFMWPGSGLKKHGFECSQICDSDPVDVSMGSAQYWS
SRSTCDGIIRPQESRMVLAKAFYLSCLNFQARPGRNGEGNKVFRM
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttcattcggcgaccacgccgcatatcctcgtcgacatgtgtcttctggaaa
gcaaatgccagctcaaaaccattcccggttttggcttcccagttaacctttgatccctca
caaattgaaaatggtcaaaaattcaacgctatgcacgagaaaagggtagaatactgccga
aatggaggagggtcaaagggtgtggaacgccacgtaaaaaagaacaggaaggtcctagtt
tgggataggattgagcaaatcttagatgaagctgccatggacgatttcttggaagtcgga
gccacagtgggaattgatctggaatacggagacgtgcctgggggcggaactgtcactgga
atagggcggatcaacaatacccatgtcatgctaatagccaatgatgccaccgtgaaaggt
ggcacttcttatcccattacggttaccaagtcactaagagcacaggagatcgcgcacaat
ctcagaattccgacgctatatatagtggacactggtggggcgttcttacccctgcagtcg
gagattttcccggacctgaagcacggtgggcgtacctttagaaatcaggccatcatgagt
ggagagggcataccacagattgccttggtatcaggaatgtgcaccgccggaggggcgtac
actccgaccatgtcggatgaggcaataatggtgaataagattgctaatatctaccttgga
ggacccccattggtcaaggcagccactggagaagttgtgactggcgaacagttgggcgga
gcccgacttcattgtgagaccagcggcattgctgaccactttgccgagactgaagctgaa
tcatttgagattgtcagagacatcattgccaccctcaacatcaatgagaactggccgtcc
aatgctaaaccagtggatccacctgaggggcaagcgggtgacttgattgctctcagtgga
tttgataaactaaataaggatgccatatacagcgtagtcagatgcctcttggacggctct
aggttcaccgagttcaagaaacggtttggccccaacttggtgaccggatttggattctta
gatgggcgtctcattggtgtccttggcaatggcggggatatcactcaacaagacgcccaa
aaaggtgctcacttcatccagctctgtgatcagaggagtattcctatacttttccttcaa
aacagctccaattccggcttggaaacttcgtatcaagatgaaacaatccttaaagaaaga
gccaaaatgattcgcgctcaagcggtagccagggttcccaaaattgcattagcagtggcg
ccagtgtgtcatgacgagctcatgaccatgtgtggtccatccggcaaccctgaattcaat
ttcatgtggccaggatctggtttgaaaaagcacggctttgagtgctcgcagatttgtgac
tccgatcctgtggatgtgtcaatgggaagcgcccaatattggtcgtctaggagcacatgt
gatggaattattcgacctcaagagagccgaatggtcctggccaaagccttttacctcagt
tgtctcaattttcaagccagacctggtcgaaatggggagggaaataaagcgggtgacttg
attgctctcagtggatttgataaactaaataaggatgccatatacagcgtagtcagatgc
ctcttggacggctctaggttcaccgagttcaagaaacggtttggccccaacttggtgacc
ggatttggattcttagatgggcgtctcattggtgtccttggcaatggcggggatatcact
caacaagacgcccaaaaaggtgctcacttcatccagctctgtgatcagaggagtattcct
atacttttccttcaaaacagctccaattccggcttggaaacttcgtatcaagatgaaaca
atccttaaagaaagagccaaaatgattcgcgctcaagcggtagccagggttcccaaaatt
gcattagcagtggcgccagtgtgtcatgacgagctcatgaccatgtgtggtccatccggc
aaccctgaattcaatttcatgtggccaggatctggtttgaaaaagcacggctttgagtgc
tcgcagatttgtgactccgatcctgtggatgtgtcaatgggaagcgcccaatattggtcg
tctaggagcacatgtgatggaattattcgacctcaagagagccgaatggtcctggccaaa
gccttttacctcagttgtctcaattttcaagccagacctggtcgaaatggggagggaaat
aaagtatttcgaatgtga
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