Tigriopus californicus (tidepool copepod): 131881567
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Entry
131881567 CDS
T09700
Name
(RefSeq) protein gooseberry-like isoform X1
KO
K09381
paired box protein 3/7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131881567
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
131881567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_29
HTH_28
TFIIA
HTH_32
Motif
Other DBs
NCBI-GeneID:
131881567
NCBI-ProteinID:
XP_059084441
LinkDB
All DBs
Position
6:complement(15143102..15154309)
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AA seq
487 aa
AA seq
DB search
MTVSNFGTMMRPMPFTGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIIEMAAAGVRPCVI
SRQLRVSHGCVSKILNRYQETGSIRPGVIGGTKPKLATPEIEKKVDNYKSENPGVFSWEV
RDRLIKEGICDKNTVPSVSAISRLLRGREDEKKDRDMSNVSVKDEEEGGEDSDLEAEPGI
PLKRKQRRSRTTFTAYQLDELEKAFERTQYPDIYTREELAQRTKLSEARIQVWFSNRRAR
LRKQAQSCPPSAYNPMGLPMSYTGNPYMSAAAMSGISPDFSTSSSVPHSSPSLSAHESSL
YSSSNISAYAASSAALNQSMNPYGSSNGGSSSLLASQMSPLNNNTLSSGSTPGGGSASNN
IHHSQQHHHQHLEEQQQQQQQQQQQQQQQQQQSHPQMSNSNPSPNFSHSKLGSSTSPSSH
LSAAASLSPHHTDLAGGLSSAAASSGFAAAENWTAALQRSAASQQMTSAAAFASHPGFAA
AGMYGWY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtcgaattttggcacaatgatgagacctatgccattcacaggatacccattt
caaggtcaggggcgtgtcaatcagctgggaggcgtgttcatcaacggccgtccactgccc
aaccacatccgtctgaagatcatcgagatggccgcagcgggtgtgcgtccttgtgtgatc
tcccgccaactccgcgtgtcccatgggtgcgtctccaagatcctgaaccgctaccaagag
accggctccatccgtccgggcgtgattggcggcaccaagcctaaactggccaccccggag
atcgagaagaaggtggacaactacaagagcgagaacccgggcgtgttcagttgggaggtc
cgggatcgactcatcaaggaaggtatatgtgataagaataccgttccgagtgtcagcgcc
atctcccgcctcctccggggacgcgaagacgaaaagaaagacagagacatgtccaatgtt
tcagtgaaagatgaggaagagggcggagaggacagcgatttggaggccgagcccggaatt
cccctgaaacggaaacaacgccgatcccgaaccacattcacggcctatcaactggatgag
ttggagaaggccttcgagcgcactcagtatcccgatatctacacccgagaggaactggcc
caacgcaccaagttgagcgaggcccgcattcaggtctggttctcgaaccggcgggcccgt
ctccgaaaacaggcccagtcctgtccaccgtcggcctacaatcccatgggactgcccatg
tcctacacgggcaacccgtatatgtcggccgcggccatgtccgggatcagtccggatttc
tccacctccagctcagttcctcactcctcgccgtcgctgtcggcccacgaaagctcgttg
tattcatcctcaaacatatcggcctatgcagcctctagtgcagccttaaaccagtccatg
aacccctatgggtcgtccaacggcgggtcctccagtcttctggcctctcagatgtcaccg
ttgaataacaataccttatccagcggatccactccaggcggtggctctgcgtccaacaat
attcaccactctcaacaacaccatcatcaacatctggaagagcaacaacaacagcagcaa
cagcaacagcagcaacaacaacaacagcaacaacagtcacacccacaaatgtccaactcg
aacccgtcccccaacttcagtcactctaaactgggctcttcgacatcaccgtcctctcat
ttgtctgccgcagcctcgctctctcctcaccacacagacttggcgggcgggttgagttcg
gctgcggccagtagcgggtttgctgcggcggagaattggacggccgcacttcagcggagc
gcggcctcgcaacaaatgacctcagcggccgcattcgccagccaccctgggtttgccgca
gcaggcatgtacggctggtattag
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