| Entry |
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| Name |
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
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| KO |
| K04952 | cyclic nucleotide gated channel beta 1 |
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| Organism |
tcf Tigriopus californicus (tidepool copepod)
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| Brite |
KEGG Orthology (KO) [BR:tcf00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:tcf04040]
131881671
Ion channels [BR:tcf04040]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131881671
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:10988751..10997758
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| AA seq |
645 aa
MSHISFENEDATSDLADQEAIDLYVRKVGPAKFEALKVHMREVAQKIRDRDEYHKEVAIR
PLTPTQDTFKALDEEVELKQAKNILILEDFSEPDPFEGMSFKQKMLKRYLTLPEAIHPQG
TLMIVLLGIQSFCVLYNAWVIPLRVTFHVYQHADNIYLWMIFDYITDCLSLLDTFLFKTR
LMFLDKDGIYCTNSQGMIKNYVTAGRFWQDILSLAPLDFLYLVFGLHGRATLLRLPRLLR
YYCVETFFDRLDAVLPYPTVIRLSRTVNVMLYLIHITACAFYAFSDMEGIDSSPFVFNGH
GNAYIRCFYVALKTSVSIGINPKPGRDRPVQMVFMGTLWLMGVFVFAVLIGNVKDIIAQA
TRNIDEYTFKFDLISQYMYAMHVPNDTMRRVKEWCQYTWKTQRSFDELSILEALPFKMRV
DVTLDVHYKTLKNVKLFHGCDPGLLKELVVKLQPLIFLPGDYICKKGDVGKEMFIITVGQ
VQVVGGPDDSIVFVTLGVGVCFGEIALLGTGKMNRRTANVRAVGYTTLYVLYKEDLTEAL
TEFPKDRELLARKAEKAAAEVKVKQETRLPQSEKLQRDVVIPAPGDPSMLKVVVKTMPEK
IKAKFQERETKAKTKVRSAQVDESQTVMANCERITVLASELINRR |
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| NT seq |
1938 nt +upstreamnt +downstreamnt
atgtcgcatatttcatttgaaaatgaagatgccacctcagatttggctgatcaagaagcc
atcgatctgtacgtgcgaaaagttggtccagcgaaatttgaagctttgaaagttcacatg
cgagaggtggcccaaaaaattcgagatcgagatgaatatcataaagaggtggcaattcgt
ccactcactccgactcaggacacttttaaagccttggatgaggaggtggaactgaagcag
gccaagaatattctcatcttggaagatttcagcgaaccggatccttttgaaggaatgtca
ttcaagcagaagatgctcaaacgttatttgactctgcctgaggcaattcatccacaagga
accctaatgatcgtcttactcgggatccaatccttttgtgtcctctacaatgcttgggtg
atccctttgagagttacgttccacgtttatcaacatgcggataacatttacctttggatg
attttcgactacattacggactgtttatccttattggatacatttctattcaagactaga
ctcatgtttttagataaagatgggatttactgtacaaactcccaaggaatgatcaagaat
tatgttactgcaggaagattttggcaagatattttatcgttagcccctttagattttctt
tatttggtgtttgggcttcatggcagagcaaccttgttgaggttaccaagattgttgaga
tattactgtgtggagaccttttttgatcggttggacgccgtccttccttatccaactgtc
attagattgagccgcactgtaaacgtgatgctctatctcattcatatcactgcttgtgct
ttctacgccttctcagatatggaaggaatcgattcatcaccttttgttttcaatggtcat
ggaaatgcctacataaggtgcttttacgttgctctaaagacatctgtgagcatcggaatt
aatcccaaaccagggcgagatcgtccggtacaaatggtgtttatgggcacactttggctc
atgggagtgttcgttttcgccgttttgattggtaacgtgaaggatattattgcacaggcg
acccgaaacatcgatgagtacactttcaaatttgatctgataagtcaatacatgtacgca
atgcatgtcccaaatgataccatgaggagagttaaggaatggtgccagtacacttggaaa
acgcaacggagctttgatgaactttccatcttggaagctttaccattcaagatgagggtg
gacgtcacattggatgttcattacaagacactgaagaatgttaagctattccatggttgt
gatccaggactgctcaaggaactggttgtcaaactgcagccactgatctttttgccaggg
gactacatatgcaagaaaggcgatgtcggcaaagaaatgtttataataactgtgggacaa
gttcaggttgtgggaggtccggatgactcgattgtattcgttactcttggcgttggtgtc
tgttttggggaaattgcattgctgggaacaggcaaaatgaatcgaaggaccgccaatgtc
cgggctgtgggatataccacactttatgtcctttacaaagaagacctgaccgaggccttg
actgagtttccaaaggaccgcgaacttttagcccgaaaagctgaaaaggctgccgccgag
gtcaaggtaaaacaagaaactcgattgccccaaagtgaaaagctgcagcgtgacgtggtc
attcctgcccctggagatccaagtatgctcaaggtggtggtaaagacaatgcctgagaaa
atcaaagccaaattccaagagagggaaacaaaggccaagacgaaagtacgaagtgcccag
gtcgatgagagtcaaacagtgatggccaattgtgagcgaatcactgtgctggcttcggaa
ttgattaatcggagatag |
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