Tigriopus californicus (tidepool copepod): 131881680
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Entry
131881680 CDS
T09700
Name
(RefSeq) protein gooseberry-like isoform X1
KO
K09381
paired box protein 3/7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131881680
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
131881680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
HTH_32
Homeobox_KN
MRP-L20
HTH_29
DUF2336
HTH_28
Motif
Other DBs
NCBI-GeneID:
131881680
NCBI-ProteinID:
XP_059084601
LinkDB
All DBs
Position
6:8139769..8145894
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AA seq
507 aa
AA seq
DB search
MVIAEFDNMSGSFNLRPFFGGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIIEMAAAGVR
PCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRVATPDVESRIEDYKKENPGIF
SWEIRDRLIKDGLCDRSNAPSVSSISRILRGSGHIVQSTIPPRHFETEEMRSRDHSIHGI
LGAHEEDDSDVDSEPGIPLKRKQRRSRTTFSAEQIEELERAFERTQYPDVYTREELAQRT
KLSEARVQVWFSNRRARWRKQVGNQQAALTAFSASAVAAAAAASVSGYSGATGNAPTVSA
GYHSLHDSSTLNPHGGASWTNNFFPHQQNPSAMSMSSSFAPQMMSMLTTSNNALSSSIGS
SGHLSQHPPPPVSSGSPHVDSPAPGNEYTESSSSLNGPPTSSPAGNANNHNDLVDANQWA
SKQSHLSSWNNQFQHMVPPGTTKMEMSSWGVDPSASAGCYGPMMNEMFGQTFAPAAAGGL
TSYPTMAALAATAGSELGNNNQYKHRP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcgcagagtttgacaacatgtccggctcatttaatctgaggcctttctttggc
ggatacccgttccaaggtcaaggacgcgtcaatcaattgggtggagtgttcatcaatggt
cgtcctctccccaatcatattagattgaagatcatcgagatggcagccgccggggttcga
ccctgtgtcatttcacggcaacttcgagtcagccatggttgtgtgtccaagatcttaaac
cgataccaggagacaggttcgattcgacccggggtgattggtgggtcgaagccccgcgtg
gccacgcccgatgtcgagagccggattgaagattacaagaaggagaatccaggtatcttc
agctgggaaatcagggatcgtcttatcaaggacggtctttgcgaccgttccaatgcgcct
tcggtgtcgtccatatcgaggattttaaggggttctggacacatagtccaatccaccatt
cctccccgacattttgaaacggaggaaatgcgcagcagagaccatagtatccatgggatt
ttaggagctcacgaggaagatgacagtgacgtggatagtgaaccgggcatcccattaaag
agaaagcaacgacgaagccgaaccacatttagcgccgagcagatcgaagagcttgaaagg
gcctttgagcgcactcaatatccagatgtttacactcgagaagaattggcacaacggacc
aaattgagtgaagccagagttcaggtttggttcagcaatagacgagctcggtggcggaag
caagtgggaaaccaacaagccgctttaacagccttttcggcctcagccgtggctgcagcc
gccgcagcctcggtcagtggttattcgggagcaacgggaaatgcaccaacggtgtcggct
ggataccattcacttcatgattcttcgacactcaatcctcacggaggcgcttcttggacc
aacaatttctttccccatcaacaaaacccgtcagccatgtctatgtcatcatcatttgcg
cctcaaatgatgagcatgttaaccacgtccaacaatgcattatcttcctcaattgggtcg
tccggccatttaagtcagcatccacctcctccagtcagttccggatctcctcacgtggac
agtcctgcccccggcaacgagtacacagagtcatcctcgtccctgaacggtccacccact
tcgtcacccgctggcaatgcaaacaatcacaatgacctggtggatgccaatcagtgggct
tccaaacagagccatttgagctcgtggaacaatcagtttcagcacatggtcccacctggg
acgaccaaaatggaaatgagctcctggggagtggatcccagtgcctctgcgggttgctac
ggcccaatgatgaatgaaatgttcggtcagacatttgctccagctgcggcgggcggcttg
acgtcttatccaactatggctgctttggccgccactgcgggctcggagcttggaaacaat
aaccagtacaaacatagaccatga
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