Tigriopus californicus (tidepool copepod): 131881763
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Entry
131881763 CDS
T09700
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00900
Terpenoid backbone biosynthesis
tcf01100
Metabolic pathways
Module
tcf_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131881763
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tcf01006
]
131881763
Enzymes [BR:
tcf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131881763
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131881763
Prenyltransferases [BR:
tcf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131881763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
131881763
NCBI-ProteinID:
XP_059084696
LinkDB
All DBs
Position
6:complement(3548463..3553253)
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AA seq
415 aa
AA seq
DB search
MEKAVLRRWRALSDLGRKWVVIQRQPLSNQAGENPKSFQINYQNLGNANLESRQDNPYIR
EIIPETVRGNVKNLHGAERGFLSVYPDVVHVISRAGENDELDISAWNTKVVTHNLSPTVL
GRRFGLLVPITYKQLNPNASRESMTQAHILGWGVEMIRGSNTLIKSLIDPPGPKDTPTWS
EKHGLGNMAFNDALFLQNGIHVLLKHFFKDDPRYHHFLDAFLIALRATTKGRLISFDDHP
SQKPGLAGYSINAYKALVRNNVSAISYCLPISLAFHKFGIHDPQVHKQIRMIFNEVGYFA
QINRDYANCYLDPSGADIKNKKLTWLVVMAKQLARDARHRQILEKCYGSDNPEDVEQVLA
IYRDLKMKKMVRGFLEQEKQDILQMIQQISKVDKAGLSPEFIFKLIDSMNVNHIA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggccgtgttgaggagatggcgagcattgagtgacttgggccggaaatgggtg
gtaatccaaaggcagcctttatccaatcaggcgggagaaaatcccaagagctttcagatc
aattaccagaatctgggcaacgctaatttggaatcccgccaagacaacccttatattcgg
gaaattatccccgaaacggttcggggaaatgtgaagaacctccacggagctgagcgggga
tttctgtccgtgtatccggatgtggtgcacgtgattagtcgcgcaggggaaaatgacgag
ctcgacatttcggcatggaacacaaaggttgtcacacacaatctgtctccgaccgttttg
ggccgaaggtttggcctgctggtgcccattacgtacaaacaactgaatcccaatgcttcc
cgggaatcaatgacgcaagcccacatcctgggttggggagtggagatgatccgagggtcc
aatacactcatcaagagcctgattgatcccccgggccccaaggacacgcccacttggtca
gagaagcacggcttgggcaacatggccttcaatgacgcccttttcttgcaaaacggcatc
cacgtcctcctcaagcacttcttcaaggacgatccgcgataccatcatttcttggacgcc
tttctcatagcccttcgagcgaccaccaaaggtcgtctgatctcgttcgacgatcacccg
tcgcaaaagcccggtttagcaggatacagtatcaacgcttacaaggccttggtccggaac
aacgtctcggccattagctattgcctgccgatcagtctggccttccataagttcggcatt
cacgacccgcaagtgcacaagcagatccgcatgatcttcaacgaggtcggctactttgct
caaatcaatcgcgactacgccaattgctacttggatccctctggagccgatatcaagaac
aaaaagctgacctggctggtggtcatggccaagcaattggccagggatgctcgtcatcga
cagatcctggagaagtgctatggaagcgacaatccagaggacgtggagcaagtgcttgcc
atctatcgagatctcaagatgaagaaaatggtgcgcgggttcctggagcaggagaagcag
gacatcctgcaaatgattcaacaaatctccaaagtggacaaagctggattatcccccgag
ttcatcttcaagttgatcgatagcatgaatgtcaatcatatcgcataa
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