Tigriopus californicus (tidepool copepod): 131881878
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Entry
131881878 CDS
T09700
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131881878
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
131881878
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_10
RRM_1
RRM_8
RRM_occluded
Ycf2
Motif
Other DBs
NCBI-GeneID:
131881878
NCBI-ProteinID:
XP_059084852
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All DBs
Position
6:14705168..14761467
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AA seq
550 aa
AA seq
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MALYAEACGHVAKRPRVDYQPSFQPTALHLAAAASTGSMAAALNASGAVPHSGILSQHYI
EQQLNRKPIEPEKPNHILLFTVLNPTYPITCEVLNTICSPVGTVLRIVIFKKNGVQAMVE
FDSIDTAKQAKESLHGCDIYSGCCTLKIEYAKPTKLNVYKNNVESWDYTNPNLGKVPAEP
KPTPAPTVSQRPVLLKEPLAAPGATVGGNSMNNGQSVAPVVTSTNLVNGNLSLVRAVTGS
ESFENGFPTTHHSPPHMTSPSQQALAVAANGLETLAGQAAVSALASQATGASMIRGAATL
LNGRSTAPSPVPGSSVSVAPSSGSTAVGGTPYQHHQGAVCMVYGLNSDKMNASRIFNLFC
LYGNVVRIKFLKTKEGCAMVQMGDGLAVERVVSNLNNNAFFDTKMQLGFSKQAFLADVQS
PYTLPDGSPSFQDFMGSKNNRFINPEMASKNRIQPPSKILHFFNTPPGLEADDIEEIFTK
SGSPKPKCIKMFPSKTERSSSGLIEFETLSEALEGLVMCNHHPVPNASSKFPYIMKLCFS
SSRSIPATIR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctacgcagaggcttgcggccacgtggccaaaagaccaagggtagattatcag
ccctcgtttcaaccgacggctctgcatctcgccgctgccgcttcaaccggtagcatggcc
gcagcgttgaacgcttcgggagcagtgccgcactctggcattttgagccagcattacatt
gaacaacagctcaatcggaagccgatcgagcccgagaaaccgaaccatatcctcctgttc
acggtcctcaacccaacatatccaatcacatgcgaggtgcttaacaccatttgctcgccc
gtgggtaccgtgctacgcattgtcatattcaagaagaacggcgttcaagccatggtcgaa
tttgactctattgacacagccaaacaggccaaagaaagccttcacggctgcgatatttac
tctgggtgttgtacactcaaaattgagtatgctaagcccaccaaattgaacgtctacaag
aacaatgtcgagagttgggattataccaatcccaatttgggtaaagtaccagctgagccc
aaacccacacctgcccccactgtcagccagagacctgtccttctaaaggagccccttgca
gcaccaggggctacagttggaggcaatagtatgaacaatggccaatccgtggcacccgtg
gtcacctcaactaatctggttaatgggaatctatcattagtcagagcagtcactggtagc
gagagttttgagaatggattccccacaactcatcattcgccacctcatatgacttctccc
agtcagcaggctcttgcggtagctgctaatggactggagacgctagctggtcaagcagct
gtgtcagctttagccagccaagccaccggtgcttccatgatccggggggccgccactctc
ctcaacggaaggtccacagctccttcgccagttccggggtcctcggtgtctgtggcaccc
tcttcggggagtacagcggtcggcggtaccccttatcagcatcaccaaggagctgtttgt
atggtctatggtctcaactcggacaagatgaacgctagtaggatattcaacctcttttgt
ttgtatggtaacgtagtgcggatcaaattcttgaaaaccaaggagggctgcgctatggtt
caaatgggcgacggtttagccgtggagcgtgtcgtgtccaacttgaacaataatgcattc
tttgacacgaaaatgcaattgggcttctcgaaacaggcattcctggccgatgttcaatcc
ccttacactctacccgatggatctcccagcttccaagacttcatgggaagcaagaataat
cgcttcatcaaccccgagatggcttcaaagaatcgtatccaacccccctctaagatcctc
cattttttcaacactccacccggactcgaagccgatgatatcgaagagatctttaccaag
agtggctctcccaagcccaaatgtatcaaaatgttcccttccaagacggaacgcagctcg
agcggtctcattgagttcgaaacgctttcagaagcgctggaagggcttgtcatgtgcaac
caccaccctgttcccaatgccagcagcaagtttccgtacatcatgaagttgtgcttttcc
agctccaggagcatcccggccaccatccgatga
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