Tigriopus californicus (tidepool copepod): 131881880
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Entry
131881880 CDS
T09700
Name
(RefSeq) sec1 family domain-containing protein 1-like
KO
K19998
sec1 family domain-containing protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131881880
Membrane trafficking [BR:
tcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
131881880
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
131881880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
131881880
NCBI-ProteinID:
XP_059084855
LinkDB
All DBs
Position
6:14214911..14220861
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AA seq
668 aa
AA seq
DB search
MSMEGTGATTLKGRQCAALRQMLGFNQPGVLGLNGPGASGAHSATPTSAPAWKLLLFDRV
GQDILAPVMNVKQLREEGVTLHLNIHSDRDPVPDVPAIYFCQATDENLRRIGEDLRLQLY
GSYYFNFISPISRQKLEDLAQAALQTQAVTQIQKVYDQYVNFISMESEMFCLRHQSSSAL
SYHALNKGSVTDTEMENMLSQMVDGLFAVCVTLGTIPIIRCPKGNAAEAVATRLDKKLRE
NLRDARNSLFVSDGIQAGQYSFYRPLLVILDRQFDLATPLHHTWTYQALAHDVLNYSLNR
VQITESTPSPMGGARSKSKTRSCDLDSKDAFWVKHKGSPFPLVAEKIQEELEDYRSKEED
IKLMKSEMGMDAMENDAAIGMLSDNTQKLTSAVSSLPALLEKKRLIDMHTSIATAILEQI
KLRKLDVFFELEEKILSRQVTDKSLKDIFEDTEAGTPEDKLRIFLIYYLCAQQVNDQEIR
ELEDILEANGCDMAGVKYLQRWKSVTRMSQQTASASDYSGGGTKTVSMFSKLMTQGSSFV
MEGVKNLVVKKHNLPVTKIVEELMEVRPGQHQDDFRYFDPKILRPTDNIPRAKNPFQEAI
VFMVGGGNYIEYQNLMDYTQQAKSGVNLSSVGQQSMSSHGKRIIYGCSTLVNAKQMMQQL
AELGHEMT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggagggcacgggggccactacgctcaaaggccgccaatgtgcggccttgcgt
caaatgttgggtttcaaccaacccggtgtcctgggcctgaatggcccaggggcgagtggg
gcccactcggccacgcccacgtccgccccggcctggaaactgctgctctttgaccgggtg
ggccaggatatcctagcgcccgttatgaatgtcaagcaacttcgagaagagggcgtgacc
ttgcatttgaacatccattccgaccgggatccggtgcccgatgtgccggccatttacttt
tgccaggccacggatgagaacctgcgtcggattggcgaggaccttcgcttgcagttgtat
ggctcgtactacttcaatttcatctcgcccatttcgcgccagaaactggaggatctggcc
caagcggcgcttcagacccaggctgtcacgcagatccagaaggtctacgatcagtatgtt
aacttcatctccatggagagcgaaatgttctgtctacgccatcagagtagctccgccctc
tcgtaccacgccctgaataaaggcagcgtcaccgacaccgaaatggaaaacatgctctcg
caaatggtggatggcctgtttgcggtttgtgtgaccctgggtacgatcccaatcattcgc
tgccccaaaggcaatgctgccgaagcagtggccactcggttggacaaaaagctacgggag
aacctccgcgatgcccgaaactcgctttttgtcagtgatgggattcaggccggacaatat
agcttttatcgacctctgctggtgatactggaccgtcaattcgatttggccacacctctt
catcatacctggacatatcaggctttagctcacgacgttttaaactattctttgaacagg
gttcaaatcactgagtcgactccctcacctatgggaggggcccgttccaaaagcaaaacc
cgttcatgtgacttggacagtaaggacgcattctgggtgaaacacaaaggatctccgttt
cctttggtggccgagaagatccaagaggagttggaggattatcgatccaaagaagaggac
atcaagctgatgaagagtgagatgggtatggatgccatggagaacgacgctgccataggc
atgctctcggataacacacagaaattgacctcggctgtgagctcattgccagcattgtta
gaaaagaaacggctaattgatatgcacacgtcgatagccacggcgattctggagcaaatc
aagctaaggaagttggatgtgttttttgaattggaggagaagattctctctcgacaagtg
acggacaagagtttgaaggacatctttgaagatactgaggccggaacgcccgaggataaa
ctccggattttccttatctactacctatgcgcgcaacaggttaacgatcaagaaatccgc
gagctagaagacattctagaggctaatgggtgtgatatggccggtgtaaagtatttacaa
cgctggaaatcggtgacacggatgagccagcaaaccgcatcagcttcagactacagtgga
ggaggcaccaagactgtgagcatgttcagtaaactcatgacccaagggtccagttttgtc
atggagggagtcaagaacctggtggtgaagaagcataatcttccggtaacgaaaatcgtg
gaggagcttatggaggttcgacccggccaacaccaagacgattttagatattttgatcca
aaaatcctcagacctaccgataacattcctagggccaagaatccattccaggaagcgatt
gtgtttatggtaggtggaggcaactacatcgagtaccagaatctaatggactacacacag
caggccaagtccggcgtgaacttgtcttccgttggacagcagtccatgagctcccatggg
aaacggatcatttatggatgctcaaccttagtcaatgccaagcaaatgatgcagcaacta
gctgaacttggccacgagatgacttag
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