Tigriopus californicus (tidepool copepod): 131882002
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Entry
131882002 CDS
T09700
Name
(RefSeq) protein white-like
KO
K21396
ATP-binding cassette, subfamily G (WHITE), eye pigment precursor transporter
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131882002
Transporters [BR:
tcf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131882002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
RsgA_GTPase
MMR_HSR1
AAA_25
ABC2_membrane_2
AAA_29
SMC_N
Dynamin_N
AAA_28
AAA_22
AAA_23
RNA_helicase
nSTAND1
AAA_16
MeaB
TsaE
DUF2399
nSTAND3
Septin
DUF815
Motif
Other DBs
NCBI-GeneID:
131882002
NCBI-ProteinID:
XP_059084997
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All DBs
Position
6:complement(11775823..11782503)
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AA seq
659 aa
AA seq
DB search
MNNHGFDTSEDRTEEPPFQPRALPLTGTSSKSDAGKRCRTTSLTVQSEQITFSWEGITVQ
TSTSSNSCFGLKHRSVSQSKKILKNVSGFVKPGQLVAIMGASGAGKSTLINSLTYRNLNG
LEITSGTRFANGVVVNPNTLTAVSGYVQQDDLFIGTLSVREQLEFQALVRMETHIPKAIR
MEKVDAVIQELGLDKCQNQYIGVPGKLDGISGGEMKRLAFACEVLTNPALLFCDEPTSGL
DSYMAQNVVQVLRALAAKGKTIVCTIHQPSSQVFALFDRILLMAEGRLAYLGDLPKAALF
FDRIGHPCPGLYNPADHYVHVLAVAPGKEEECRAKVKEICEIFENSLEGQNVFNEVQHQK
NHVGSIPNFGSNNGSGKISPYRASWYEQFKALLWRSWLSVIKNPSVTKVRFAQTLLISLV
LGLIYLNQELSQEGVMNINGALFLLLTNMTFMNLFTVMNVFSLELPIFLREHFNGMYRVD
VYYICKQLAELPIFLAFPILFVSIYYWMVGLNPLAGRFFVTMAIATLITQVVISFGYFIS
CVTPNLSVALALAPPLIIPIMLFGGFFLNFEAIPEWLGWLQYLSWFKYGNEILVINQWKG
ITLNCTGHCNFETGQDVIDFYNFDESNYGFDIAMLVVMTILFRVLGFLALLARTYQKQK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccatggctttgacacaagtgaagatcgaacagaagaacctccattccaacca
agagccttgccattgactggaacctcctcaaaatcagatgctgggaaaagatgtcgaacg
acttcactcactgtacagagtgagcagataaccttttcttgggaaggtatcaccgtccaa
acttccacttctagtaactcttgctttggactcaagcacagatccgtttcgcaatccaaa
aaaatattgaaaaatgtgagtggtttcgtaaaacctggtcagctggtggccatcatgggc
gcctcaggcgctggaaaatcaaccctaatcaactcattaacgtaccgaaatttgaatgga
ttggagatcacctccgggacaagatttgctaatggggtcgtagtgaatcccaatactctg
acagctgtttctggctacgttcagcaagatgacctttttattggaacattatcagtcaga
gaacaactggaattccaagctttagttcgaatggaaacccacattcccaaggcaattaga
atggagaaggttgatgctgtgatccaggaacttggtctagataaatgccagaaccaatac
attggtgtccctggcaaattggacggaatctctggaggagaaatgaaacgattagctttt
gcttgtgaggtactaacaaatccggctctcctcttttgtgatgagcccacatctggactg
gactcatatatggcccaaaatgtggttcaagttctcagagctctggcagccaaaggcaaa
accattgtttgtaccattcatcaaccaagttctcaggtctttgcattatttgaccggatt
cttctcatggctgaaggacgtttggcatatttgggtgatttgcccaaggctgctctcttt
tttgacaggattggacatccttgcccaggcttgtataatccagcagatcattatgttcac
gttttggcagtagctcctggaaaagaggaggaatgtcgggcaaaggtcaaagagatttgt
gaaatctttgagaactcacttgaaggtcaaaatgttttcaacgaggttcaacatcagaag
aaccacgtgggctcaattcccaattttggaagtaacaatggatccggaaagatcagtcca
taccgcgcctcttggtatgaacaattcaaggctttactctggaggagctggttatctgtt
atcaagaatcccagtgtgaccaaagttcgattcgcacaaactttgttaatcagcttggtt
ttgggattgatctatctaaaccaagagctgagccaagaaggtgtaatgaacatcaacggc
gctttattccttcttctaacaaacatgacttttatgaacttattcaccgttatgaacgtt
ttttctctagaacttccaatcttcttgagggagcattttaatggaatgtacagagtggat
gtctactacatttgcaaacaattggccgagcttcccatatttttggcttttcccatttta
tttgtcagcatctattattggatggtgggactgaaccctctagcaggacgattcttcgtc
acaatggcaattgccacattaataacacaagtggttatcagctttgggtatttcatctct
tgtgtgactcccaacctatccgtggctttagccttggcccctccacttatcattccaatt
atgctctttggaggtttcttcttgaactttgaggccattcctgaatggttgggatggcta
cagtatttatcatggttcaaatatggaaacgagatcctagttatcaaccaatggaaaggg
atcactctgaattgcacaggacattgcaattttgaaaccggccaagatgtgatcgatttc
tacaattttgacgagagcaactatgggtttgacattgcaatgttggtggttatgaccatt
ctgttcagggttttgggctttttagcccttttggctcgaacatatcaaaaacaaaaataa
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