Tigriopus californicus (tidepool copepod): 131882032
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Entry
131882032 CDS
T09700
Name
(RefSeq) rRNA methyltransferase 1, mitochondrial-like
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131882032
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Other ribosome biogenesis factors
131882032
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
131882032
NCBI-ProteinID:
XP_059085038
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Position
1:13051435..13054877
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AA seq
296 aa
AA seq
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MDYDLTPYLFQMILKGRFSSGNLQILRRMSFNKRRRPSNVEAIFTQGEILSGIHPVQMAL
KAKNRKIHQVMYNPGSKRTETLLELAFARGIPIKQVAFAELNILASQAEKKAVHQGVVAD
VSRLIPTDIRNEDVDTRENLWVLLCGLKDPMNVGAVIRSCYFMGVNRVICPAEYAQCPLS
PVVSKASAGVLEIFPPFSISHDVQGFLHDQIQSGWDVIGSEVYSDTAQASEYHPSTKPKR
ILILGSEGSGMPEELEPFCQRFIHIKPGRDLDPCVDSLNVSVAAALLIEQLRHDHK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggattatgacttgacaccatatttattccagatgattctcaaaggccgcttcagttca
ggcaatcttcaaattcttcgccggatgtcctttaataaaaggcgtcggccttcaaatgta
gaagccatctttactcaaggcgaaatcctcagcgggattcatcctgttcaaatggctttg
aaagcaaagaacaggaaaattcatcaggtcatgtacaaccctggttctaaacgaaccgaa
acgcttctagagttggcctttgctcggggaatcccgataaagcaagttgcatttgcagaa
ctgaacattttggctagccaagccgaaaaaaaggccgttcatcaaggtgtggtagccgat
gtcagtcgtctgataccgacagatatacggaatgaagatgtggatacgcgtgaaaacctg
tgggttctgctctgcggcttgaaggatcccatgaacgtgggggccgtgattcgctcttgc
tacttcatgggggtgaatcgggtgatttgcccggcagaatatgcccaatgcccactctct
cccgtggtgagcaaggcaagtgcaggtgttctcgagatttttccgccgttttcaatctca
catgacgtccaaggattccttcatgaccaaatccaatctggatgggatgtgatcggatcc
gaggtttactcggacacagcccaagcatcagaatatcatccaagcaccaaacccaagcga
atattgatcctagggagtgaaggctctggcatgccggaagaattggaacccttttgtcag
agattcattcatattaagcctggacgtgacttagatccatgtgtggattccttgaatgtg
tccgtggctgcggcattgcttattgagcaactaagacacgaccataaataa
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