KEGG   Tigriopus californicus (tidepool copepod): 131882088
Entry
131882088         CDS       T09700                                 
Name
(RefSeq) rhodopsin-like
  KO
K04250  rhodopsin
Organism
tcf  Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:tcf04030]
    131882088
G protein-coupled receptors [BR:tcf04030]
 Rhodopsin family
  Vision
   Opsin
    131882088
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srx 7TM_GPCR_Srsx 7TM_GPCR_Srw 7tm_4
Other DBs
NCBI-GeneID: 131882088
NCBI-ProteinID: XP_059085110
LinkDB
Position
6:complement(5560273..5573152)
AA seq 461 aa
MALEFPSIMNMVLDPRRNSSLLRISSESIDSFTGSSNESAWEYAESPAIPSEIFWGSSCY
LILVGSFGIASNLTVLIVFLTHKKLQTPFNLVLMNLIVAELLISLIGIPIDLTASLLQGW
KLGYHLCLVTGFSMTLLGMVSIFTLSSLAIQRWMLVTRPGKFSLNNWTHTRLNLALIWFL
SIAVALPPLLGWSFYAPETSGLSCAPAWEDPKSIGFNWYMLSLGFFLPTSAMVYTSGSVL
LNLKVNASNQKAASVIRRSAQKRENKVTRMVMFMMTSFTICWFPYALMCLYRILIGHTAP
LMSAFPLLFAKSSICWNPIIYILMNNQFNALLIPKFWRNVSSDDGSHTTNHHPTKPPHIK
NRFTSPAPLIGSLSGQTYDMSSKDKPRPDSHNTQVLDQPNSEQIGSIRITFTQPWRDGSK
LADMDSTEAVYGDESAYRNKTTIARIQYTSNFKDFKEDTRF
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggctttggaattcccctccattatgaatatggttttggatcccaggaggaattcgtct
ctcctgaggatttcaagcgagtccatagactccttcaccggctcctccaacgagagtgcg
tgggagtacgctgagagcccggccatccccagtgagatcttctggggatccagttgctac
ttgattctggtggggagctttgggatcgccagcaacttgacggtcttgatagtgttcctc
acgcataaaaagctccagacgcctttcaacttggtgttaatgaacttgatcgtggcggag
ctgcttatttcgctaattggcattcccattgatctcacggccagcttgctccagggttgg
aaactcggataccatctttgtctcgtgaccggattctccatgacactcttgggcatggtc
tccattttcaccctatcctctttggctattcaaagatggatgttggtgactcgacccggc
aaattctccctcaacaactggacgcacacccgattgaacctggccctgatttggttcctc
tcaatcgccgtggccctcccgcctctactaggctggtccttctatgccccggagacctcg
ggactaagttgtgcaccagcttgggaggaccccaaatcgatcggtttcaattggtacatg
ctctcccttgggttctttttgcccacttcggcaatggtctacacttcggggagtgtcctt
ctgaacctaaaagtgaatgcgtccaatcaaaaggcggcctcggtgattcgtcggagcgct
cagaagcgcgagaacaaagtgacgaggatggtgatgttcatgatgacctcgtttaccatt
tgctggtttccatatgccctcatgtgtttgtaccggatcctcattggccataccgctccg
ctgatgagtgcgtttccattgctttttgccaagagctccatttgttggaatcccatcatc
tacattctcatgaacaatcagttcaacgcgcttctcattcccaagttctggcggaatgtg
tcctcggatgacggctcccacaccacaaaccatcaccccaccaaaccaccccacatcaag
aaccggtttacgtcgccagctcccttgatagggtcgctttcgggtcagacctacgacatg
tccagcaaagacaagccacgccccgattcacacaacactcaagtgctagaccagcccaac
tccgagcaaatcggtagcatcaggatcaccttcacccaaccttggagggatgggtccaaa
ctggccgacatggacagcactgaggcggtttacggggatgaaagcgcatatcggaacaag
accacgattgcccgtatccaatacaccagcaacttcaaagacttcaaagaagataccaga
ttttaa

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