Tigriopus californicus (tidepool copepod): 131882147
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Entry
131882147 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: transformer-2 protein homolog beta-like
KO
K12897
transformer-2 protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131882147
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcf01009
]
131882147
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131882147
Protein phosphatases and associated proteins [BR:
tcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131882147
Spliceosome [BR:
tcf03041
]
Common components
Common spliceosomal components
SR proteins
131882147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
131882147
NCBI-ProteinID:
XP_059085191
LinkDB
All DBs
Position
6:complement(712931..715429)
Genome browser
AA seq
192 aa
AA seq
DB search
MSDRRRHVGTREAPQPTCCLGVFGLSLYTTERELKKEFSRFGPLERVQVVLDGKTGRSRG
FAFVYFESQEDAKAAKEALCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYSDSRGGR
GSRGGGDRGDYGGRGGGGGDRGGDRGHRRSPSPYYRGGGGGGGSRRRDYRSRSRSYSPRD
VEECFMLSRGVS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccgtcggcggcacgtgggcacgcgagaggcgccgcaacccacgtgttgtttg
ggcgtgttcggcttgagtttgtacacgaccgagcgcgagttgaaaaaggagttttcccgc
tttggtcccctggaacgggtccaggtggttttggatggcaagacgggtcgttcgcgcggc
tttgcctttgtgtatttcgagtcccaagaggatgccaaggcggccaaggaagccttgtgc
gatcaggaaatcgatggacgacggatccgggtggatttctccatcaccaaacggccacac
acgcccacaccgggggtgtacatgggtcggcccacctattccgacagccgagggggtcgt
gggtcgcgaggcgggggcgatcgcggagattacggagggcgtggtgggggaggtggggat
cgtggtggtgaccgaggacaccgccgatctccctcgccttactaccgcggcggtggtggt
ggcggtggtagtcgtcgacgagattatcggtcgcgttcacgctcttactcacctcgtgat
gttgaagagtgcttcatgttgtcccgaggcgtgagctga
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