Tigriopus californicus (tidepool copepod): 131882219
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Entry
131882219 CDS
T09700
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
Organism
tcf
Tigriopus californicus (tidepool copepod)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_5
AAA_7
AAA
AAA_28
Rad17
AAA_29
AAA_30
AAA_25
AAA_24
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
131882219
NCBI-ProteinID:
XP_059085283
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All DBs
Position
6:510197..522164
Genome browser
AA seq
1451 aa
AA seq
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MGTSKRHSTEKVQPFKDSPKEVTACEEEIEDKVKQEKKKDEEPSLPPVAIHRLFRFASSR
DLFLIFLAIIAAIIGGCSMPVMIILFGDLANTFVQNDLNVSQICVGIPFCCDNTPAINLD
LPNCNVTEEDLGNFFINMNFLDQITKFAQGTALIGLVNFVMSYIFVTCLNHAAECQVFKI
RGLFLKAILRQDIGWYDTHQTGDFASRMTEDLNKVQEGIGEKIGMFIFFATIFIASLINA
FVHGWELTLVILSVMPVLVIATAIIAGSQTYLTARELKAYGKAGSVAEEVLSAVRTVVAF
GGQTKEVNRFENNLHDARKAGIMRGLLTGIGGGFMWLVIYASYALAFWYGVKLIMDDTED
CFEDILHCDPRYDASSLLVVFFSVLMGAMNVGQATPYVEAFSVARGAAAQIFDIIDRVPK
IDSSSTEGEHPEKGAGNLSFKDVFFNYPSRKDVKILNGLTMVVNKGETVALVGSSGCGKS
TVIQLVQRFYDPWSGSVMLNGKDLRQLNLSALRERIGIVGQEPVLFGCSIAENIRYGRED
IDDSDIEQACKDANAYSFIRNLPKKYDTLVGERGAQLSGGQKQRIAIARALVRNPDILLL
DEATSALDTQSEGVVQAALDKARCGRTTIMVAHRLSTIRTADKIVALEDGRVAEMGTHNE
LMKMKGVYFGLVTAQGGQNVEEEMVEEEKEEDDDDVPELKIVEQGRFEREAGGGRVRKQS
DRKASTTSSILSEDSVTIEDVGHAIGSAVGFSRVPSLRSSLRNPLHKELFAASVLIALQI
SEDAGEDLPKVSMIRILKANSPEWPYMLIGLIASIIMGASMPVYAILFGEVLGVLSEDPV
SARDNVSYYCILFLITGVVVGTAMFLQISMFTLAGEHLTLRMRKLSFEAMLRQEMAWFDL
PSNSTGALCTRISSDASAIQGMSGSRVSSTLQSASSVLFSVSLSVWFEWKLGLVVSVYVP
WLALSSWLQAKIMAGHFNAFRAHQENASQASGTPLGTLFQSFFTLTISIGLAMYYQWQLG
LVTSVFIPFVLVALYFQTKMIMGSDSVQKEAFASSAKLAIEAISNIRTVAGLGRERTFEE
LYLAALRQPHVDAKKRSHVRGLIFGFAQSVPFFAYSGCMFYGGWLVENQDLDYKNVFKVA
EALILGTMMVGQATAFAPNYNKALLAAARVFKLLDRKPQIDANDATGLRMNNIQGNISFS
QAGFHYPTRKEVRVLRELDLSVQAGQTIALVGPSGCGKSTCIQLLQRFYDLHKGSLNIEG
ENVQALNVPQLRSRMGIVSQEPVLFDRTLAENIAYGDNSRTASMDEVVDAARQANIHSFI
TSLPMGYDTMVGEKGTQLSGGQKQRVAIARALIRNPAVLLLDEATSALDTESEKVVQAAL
DKAQEGRTSITIAHRLSTIQNVNRIFVISKGRVAESGTHSELLARKEGLYAKLWGSQTLT
KGDSVEDRTQK
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgggaacctcgaagagacattccaccgagaaagtgcaacctttcaaagactctcccaaa
gaggttactgcctgtgaagaggaaatagaagacaaagttaaacaggagaaaaagaaggat
gaagaaccttccttgccaccagtggctattcatcgactcttccgctttgccagttccagg
gatttgttcctcattttcttggccatcattgccgccattataggaggatgctccatgccc
gtgatgatcattctctttggagatttggccaacacattcgttcaaaatgacttgaatgtc
tcacaaatatgcgtgggtattccattttgttgtgacaacactccagcgatcaatttggat
ttgcccaattgcaatgtgaccgaggaggacttgggcaatttcttcatcaacatgaacttt
ttggatcaaatcacaaaattcgcccaaggcaccgcattgattggcctggtcaatttcgtc
atgagttatatcttcgtaacgtgcttgaatcacgccgcagaatgccaagtgtttaagatc
cggggactttttctcaaggccattttgcgacaagatattggttggtacgatactcatcaa
accggagattttgcctcccgcatgacagaagatctgaacaaagtccaagagggaattggg
gaaaagattggcatgttcatcttctttgccaccatattcatcgccagtttgatcaatgcc
tttgttcatggctgggaattgaccctggtgatcctctcagtgatgccggtgttagtaatt
gcgacggccattattgctggctcgcagacttacctcacggccagggaattaaaggcctac
ggtaaagccggatctgttgctgaggaggtcctatcggctgttcggacagtggtggctttc
ggaggtcagaccaaggaagtcaacaggtttgagaataacttgcacgatgcgaggaaagcc
ggaattatgcgaggtctcctcactgggataggtgggggcttcatgtggctcgtcatttat
gcatcttacgcgctcgccttttggtatggagtaaagctaatcatggatgacacagaggat
tgttttgaagatattctccactgtgatccgcgatatgacgcttcaagcttgctggtggtt
ttcttttctgttctcatgggggccatgaatgtgggccaagccacaccttatgtggaggcc
ttctcagtggcacgtggagcagccgctcagatttttgacattatcgatcgagtaccaaag
atcgattcttcaagcactgaaggagagcacccagaaaagggcgctgggaacttgagtttc
aaagatgtgttcttcaactatccatccagaaaggacgtcaagattttgaatgggctgacc
atggtcgtgaataagggggagactgtagccttggtggggtcctcaggttgcggaaaatcc
acagtcatccaattagttcaacggttttatgatccttggtcgggatcagtgatgctgaat
gggaaagaccttcgccaactgaatctgtccgctctgcgagaacggattggcattgtggga
caagaacccgtgctgtttggctgctcgattgccgaaaatatccgatatggccgagaggac
attgacgactccgacattgaacaggcttgcaaagacgccaatgcctattcgttcatccgc
aacctccccaagaaatatgacacattggttggagaacgtggagctcaactctccggagga
cagaagcaaaggattgccattgccagagcgcttgtgcggaatccggacatcctactcctg
gatgaggccacctcggctttggacacgcaaagtgagggtgttgttcaagccgctttggat
aaggcgcgctgcgggcgaacaaccattatggtggcacatagattgtcaaccattaggacg
gctgacaagattgttgcccttgaagatggcagggtggccgaaatgggtacccataacgaa
ctcatgaaaatgaaaggcgtctactttggtttggttactgcccagggaggacaaaacgtt
gaagaggagatggtggaggaagagaaagaagaagacgacgatgatgtccctgagctaaaa
atagtggagcaagggaggtttgaaagggaagcgggaggtggccgtgtgcgaaagcaaagc
gacaggaaagccagtactactagtagcatcttgagcgaagattctgtgacaattgaggat
gttggacatgccattgggtcggcggttggtttttctcgagtcccctctttgcgctccagt
ttacgcaatcctctccacaaagagttatttgccgcttctgtgttaattgccttacagatc
tctgaggatgctggagaggatctgcccaaggtctccatgatcaggatcctcaaggccaac
tccccggagtggccttacatgctcatcggcctgattgcttcgatcatcatgggggcttcc
atgcctgtgtatgccattttatttggagaggttctaggagtgttgtccgaggatccggtt
tctgccagagacaatgtgtcctattattgcatcctgttcctcatcaccggtgtggtggta
ggcactgcgatgttcctgcaaatctccatgttcactttagctggagagcacttgaccttg
aggatgaggaagctctcgtttgaggccatgttgagacaagaaatggcgtggtttgatctg
ccatccaatagtacaggcgctttatgcacccggatctcttcagacgcctccgccattcaa
gggatgtcgggaagccgagtgtcctccacactccagagtgccagttctgtgttgttttcg
gtttcgttgtccgtttggtttgagtggaaactcggtttggtggtcagtgtttatgtgccc
tggctcgcgctcagctcttggctccaggccaaaataatggctggccatttcaacgccttc
agagcccatcaagaaaatgcctctcaagcttccggtacgccgctgggtactctgttccaa
tcgttcttcactctgaccatttccattggcttggccatgtactatcaatggcaattgggc
ttggtgacgtccgttttcattcctttcgttctggtggctttgtacttccaaaccaaaatg
atcatgggctctgactccgtacagaaggaggcttttgccagttcagccaaactggccatc
gaggccatcagcaatatccgcactgtggccggattgggtcgagaaaggacgttcgaggag
ctgtatttggccgcccttcgtcagcctcacgtggacgccaagaagcgctcgcatgtgcga
ggattgattttcggatttgcgcaatccgtgccatttttcgcttactcgggatgcatgttc
tacggaggatggctggtcgagaaccaagacctggactacaaaaacgtgttcaaagtggcc
gaggccttgattttgggaaccatgatggttggccaagccacagcctttgctcccaactat
aacaaggctctcctggcagcagcccgtgttttcaaacttttggacaggaaaccccagatc
gacgccaacgacgccaccggactccgcatgaacaacattcaagggaacatttcgttcagc
caggccgggtttcactatcccacccggaaggaagtgcgtgtccttcgtgagttggatttg
tcggtccaagcgggccaaaccatcgccctggtgggcccttctggttgtgggaaatccacg
tgcattcaactgttgcaaaggttctacgaccttcacaaggggagtctcaacatcgaaggc
gagaatgtccaggctttgaatgtgccacaactccgatccaggatggggatcgtgtcgcaa
gaaccggtcctcttcgatcgaactctggccgaaaacatcgcctatggagacaacagtcgg
acggcctccatggacgaggtggtggacgccgctcggcaagccaatattcactcattcatc
acctctttgccaatgggatacgataccatggtgggcgaaaaaggaacgcagctttcgggc
gggcaaaaacaacgcgtggccattgcgcgcgcgctcattcgaaacccagccgtgcttctt
ctagatgaggccacgtcagcacttgatacggaatcggaaaaggtggttcaagcggccttg
gataaggcgcaagaggggcggacctccatcacgatcgctcatcgtctgagcaccatacag
aacgtaaatcgcatttttgtcatctccaaggggcgtgtcgcagagtcgggcacccacagt
gagctcttggcccggaaggaaggcctttatgccaagctgtggggcagccaaaccttgaca
aaaggagactcagtagaggacagaactcagaagtag
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