Tigriopus californicus (tidepool copepod): 131882239
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Entry
131882239 CDS
T09700
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131882239
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Other domain-containing proteins
Patched domain-containing proteins
131882239
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
131882239
NCBI-ProteinID:
XP_059085315
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Position
6:7293607..7298081
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AA seq
874 aa
AA seq
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MCSQNFVDKFMRIVFSWLGRQVGQRPVPFIIVPLLMTVTSFLGFYYAKHASDPEFLFLPI
NGEAKYERAITESFFPTNYSAFDPGRITRNGRFGRLLITAQDNETLLRDDMFREMLILDE
LVRNMTFSFENQTWKYEDVCAQNNGQCWKNDILLPASVMAKVENKTAFLTYPIWFSPLTF
DRVIFPFFAGGIQISKTHTINSIYVVSLNYFLKSGTKEDMNRGQAWERAFLDLVGSVPFD
HIKVARFSSLTLEIELENNTNSVMPYFSINIAIMVIFCVITCMMSDWVRSKPYLGLIGVV
SALLGSITAFGVVMLTGVPFIGINLAAPFLMLGIGIDDTFVFLSAWRRTNPLDDVPKRMS
NCFEDSAVSITITSLTDMLSFFVGVITPFPSVKIFCIYTGTAVGFTYLFHIFFFGACLAI
SGYAEDKNRHAFTCLTVLPKSLSSDRSYFYRLFCSGGINRQDPGNREDHATFDLMEFFRG
PFSRFLLNRYARIMILLTFFVYVAVALYGVSNLKEGLERKNLARLDSYSLDFYTLEDTYF
RDYPYRVSVRVVFSGKINYSDPLVQLDVEEIMQRLENTTFIDPIYSESWLRDFLDYVKRN
EDYDPIDISTEERFVDALMNIYLGTPFNPYLNDVHLDDGKVDAARFLIQGKNIKNAVDEK
IFVQELRDVCKSTSYNVSAYHPYFMYFDQFLLVLPMTIQCVTVAAVIMMVIALVFIPKPI
CALWVAFSIVSIEIGVIGFMTLWGVTLDSISMINLIMCIGFSVDFSAHISYHFMAKANLD
PADRVADSMHALGLPITQGAISTILGVVGLVMAPSYIFIIFFKMVFLVIFLGALHGLFLL
PVLLTTFGTNASSNSETKKLNEMNCQVNRAYTSE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtcaaaattttgtggacaagttcatgcgcattgtcttctcgtggttgggaaga
caagtgggtcaaagaccagtgccattcattattgtgcctctgctcatgacagtgacctcc
ttcttgggattctattatgccaagcacgcctcggatcccgagttcttattcttgcccatc
aatggtgaggccaaatacgaaagggccatcaccgagtcctttttcccaaccaactactcg
gcctttgatccgggacgaatcactcgtaacgggcgattcggtagactcctgatcaccgcc
caagacaatgagaccttgttaagagatgatatgtttcgagaaatgctcatcttggacgag
ctggtccgaaatatgactttctcttttgagaaccaaacttggaagtacgaggatgtttgc
gctcaaaacaatggccaatgttggaaaaacgacatcttattacccgcctctgtgatggct
aaggtggaaaacaaaaccgcgtttctgacctatccaatctggtttagtcctctcaccttt
gatcgggtcattttcccgttctttgcgggagggatccagatttccaagacccacaccatc
aacagcatctatgtcgtcagcttgaactacttcctcaaatctggcaccaaagaggatatg
aatagagggcaagcttgggagcgagcttttttggacttggtgggctccgtacctttcgat
cacatcaaagtggcccgattctcatccttgactctggagatcgaattggaaaataacacc
aattctgtgatgccttacttttccatcaacatcgccatcatggtcatcttttgcgtgatc
acttgcatgatgtcggattgggtgcgctccaagccctatctcggccttattggtgtggtt
tccgctctattgggatccatcactgcctttggcgtggtcatgctgacaggagtgccattc
attggcatcaacttggcagcccctttcttaatgctgggcattggtattgatgacaccttc
gttttcctgagtgcctggcgtcgaaccaaccctttggatgatgtgcccaagcgaatgtcc
aattgctttgaggactcggctgtgtctatcaccatcacgtcattgactgacatgttaagt
ttcttcgttggagtgatcacaccgtttcccagtgtcaagatattctgcatctacacgggt
actgccgtgggattcacttatttgttccacatcttcttctttggagcatgtctggctatc
tctggctatgcggaagacaagaatagacatgcgttcacgtgcttaacggtgcttccaaag
tcgctctcaagcgaccgttcctatttctatcggctgttttgtagcggtggtatcaatcgc
caagacccgggaaatcgagaggaccacgcgacgttcgacctcatggaattctttcgtggg
cctttctctcgttttttgctcaatcgttatgctcgcatcatgatccttttgaccttcttt
gtttacgtggctgtggcactttatggcgtttccaacttaaaggaaggcttagagaggaag
aatttggctcgacttgattcatattccttggatttttacaccctggaagacacatatttc
cgcgattacccataccgcgttagcgtaagagtggtcttttcgggcaaaatcaattactct
gatccattggttcaattggatgtggaagaaattatgcaaaggctggaaaacacgaccttc
atcgatccaatctactctgagagttggctgagagactttttggattatgtcaaacgaaac
gaggactacgacccaattgacatttcgactgaagaacgttttgtcgacgcgttaatgaat
atttatttgggcacgcctttcaacccttacctgaatgacgttcatttggatgacggaaaa
gtggacgcagcgagatttctgattcagggaaagaacatcaaaaatgctgtggacgagaag
atattcgtccaagagctccgagacgtttgcaaatccacaagctacaatgtgtccgcttat
catccctacttcatgtattttgaccagtttctcttggttctccccatgaccattcaatgc
gtcactgtggcagctgtgataatgatggtcattgctctcgttttcatccccaaacccatt
tgcgccctttgggtggccttctctattgtgtcaatcgagattggcgtgattggtttcatg
actctgtggggcgtaactctggactccatctcgatgatcaacttgatcatgtgcattggc
ttctcagtggacttttccgcccacatttcgtaccatttcatggccaaggccaatctcgac
ccggccgatcgagtggccgatagtatgcatgcattgggcttacccatcacgcagggggcc
atctccaccattttgggcgtggtcgggctggtcatggcccctagctacattttcattatc
ttcttcaagatggtgttcctggtcatcttcctgggcgcccttcacggtctgttcctcttg
cccgtgttattgaccacgtttggaacgaacgcatcaagtaacagtgaaaccaaaaagctc
aatgaaatgaattgccaggtcaacagagcctacacgagcgagtga
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