Tigriopus californicus (tidepool copepod): 131882312
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Entry
131882312 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131882312
Organism
tcf
Tigriopus californicus (tidepool copepod)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
fn3
I-set
Ig_3
Serglycin
Motif
Other DBs
NCBI-GeneID:
131882312
NCBI-ProteinID:
XP_059085404
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All DBs
Position
1:complement(9779170..9789065)
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AA seq
2321 aa
AA seq
DB search
MALSLIFLINLTLVFATCPEKATLEDITTFPEIGQIDSQHVFVNWTRLWPEVSWTNCFSS
AVIVINGRDVVDVQDLSVKVQSLEVEPCQEIRVIIEVTLMETNDDIESMPSERDFQTFRS
PKGRVLSLDSAESDQIVKYKDHWNGTLDLSTILIETYFRQVIEDPQCHRIAQVELRYRVV
GTDLWNIVKSMDIFNKLKEEITGLDICFEYEVALELIGTTGTESTTVNLGRIGPPSNDVI
KSAMASGFSYEPPSAQDISASEIFATSTVLRWTMPNSCFHGVNVSLVSSFSGQLVQERDE
AGRSSALSPVVASQTVMTTSLEDLTPCQDYTVLLESYFTVDLGEGLFYRSAPNSLPEIQF
ITRPDFSDEHTQFAITSLRSKRRGSSMSLSWRKSEWPCLGPKHYNVWICSKQSTNQSSSP
WSDAKSSESLFEEVEEDDGDDDDDHHDDEEEEEGEDEDENEIGDGQERKEEKCLESQEII
SDGKNMAVKFQGVDTCNTLKIRIGVNMKDELTDEAESTNLPEYMDIDTSVELDQSKWTFE
TVLVSKKSVEAPKGLTLFSVSDHTVTIRWRVDSCATSYLVSLSTGSKSWKGEFGAKTSHL
LAANQVHKVLMDVMDGSTSEDNMSANDSDTSLYDSSSYEDDEAHEVLARKKRDFSEQMLA
YDYEADLIAENPHMQGSSFTQDNSITSLDVDDEDYSDEEGSGSGSGSGSGSGDDAPVEDL
TKAENLSKHIIVDDDNPIMAEFKIQDLQPCTDYVIQVMNFYTIDGNDIFGPPSKIQAQTQ
CPEGEPATTVGPFSSTSISIQPEETTFEAHADETTYSPLIGETTDDNPVQVTTTKTPFED
PSITTMNSPTTTIQTTPTYEITTSWEYLLEDSLDSTTELEATITATTTTTTTTTTSSTTT
STPTTTTKPMIPFIGFEVSENSNGTFSVVWEQATDIQAELEIQSTNGTNAIYKFERSSNP
GTYLRQEQALNLQPCSIYYIILYERNSDGEVTEFWRHTVQVTPNPDLEFELASPQIVVSK
NVSSGKGNVRFEWTHSQDCIKAYVITLSQDDLFGITEVEPKAIGESISIDLHMMPGNLTL
KNCHKYLLTIQPQTEAEIEEGALWQKGYSKPFRYMLADDGAPNDVQDKISITPTSFQIEL
SWPEPLSCKEMTLSVASNRHIYNDHGHTQFIHATDIPIFSERYIISDLRPCFDYKLILSV
DDGILLDKTISTIKNETVVEELNAQEVAIWKEDQDPTQVKVEWASRCVETFSFEYCRFPT
GCIKETGRVTRGVALIDLSVLPSITLEALIPCQMYRFEIDTSLIGQIYEGNFTTHFSDGL
AFDFPEFHFEFRNDPIHVTWEHVYPCVDKYDINLTSSNGTTLLSTKIQPDTLGSISFDLS
INLDESGSQLDQCSNYTLQIIPRLTANYSSTTWESRSMRQVEFLFLSETPIPTRISHLVN
ESGAHISWPGSSCLSAYILVLTDAHGNKLVNKTLADNSTSIPMNALKHCTQYHIKIWSIS
ELGKSDDHASSEFMTDHPDEILLHHNASYESIEVRAELHGMDCVDHYKVFLCSVEKVQCW
DQSLSSDQENMVVFENLTEGSPLVIQLVGYNTRGQELYFSSEKVVETRHRIKATLKEGQV
TEHSVQFTVESSFFESGLDSRLEWWVEVSCSHKDETLISKGAHKTIKFTDLDPFTMVLCS
GTFYTEQEEEDMGSVWIKTNQAAPSSPQDLRIELVNSTQIVIQWNGPQSVPGIIEDYELT
YNYECKPDSSCADKECGRQNNHTIQGDQSFLQLTVKPFRSYVFDVSAKTKHPSRGPNHGP
ITFETPSGQPAPATLRKLEKLSSDSVLIEFEEGCPINGEVGHEVQWLCNGCKMPPQPSVK
IHHDLSVEVSNLQGGYFYDFWIESSTRDCADSNCTASSEAKVVYLDCEYQCRDGTCINRG
WKIKCDFVRDCPDGSDEEGCTCDPPFKFECSNKHCVESWRRCDGNADCNDFSDEANCPTC
HDNQFRCEGTQECIAKNMTCDRMVQCRDGSDEKGCAYWTSSCWPDKFRCLDHTCIDIRHR
CDGIWDCVNGEDELSCNTICDKVDEFACKNRECIPHGQYCNGQKDCSDGTDELFECHCHK
NGQFACVSGNECVPRLKVCDATLDCSDGSDERGCGAKKSSLPTNPVKSPVNLDAESVFGT
RHEISNENGPDTVLADALEFAEQAQQDSAENAFVDYSEIRPLFQPSFYETGFESANQVKE
KSKYNLKVYPQVQEVYEGHDVVLQCRDEGDLRAPVVWKRPNGKSLPKPSHQEFGRLEITS
IFRFQEGSYLCVVENDPNHSEGQAKAEVKVVTYPARSQNAL
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcactgatctttttaattaatttgacccttgttttcgccacttgtccagaa
aaggcaacgctcgaagacattactaccttccccgaaattggtcagatcgatagccaacat
gtctttgtgaattggaccagactttggccagaagtctcttggacaaactgcttctcatcg
gcagtgattgtcatcaacggtcgtgatgttgtggatgtgcaagatttgtctgttaaggta
caatcattagaggtggagccgtgccaagagatcagagttataattgaggttacgctgatg
gagaccaacgatgatatcgagtcaatgccaagtgagcgtgattttcagaccttccgaagt
cccaagggcagagtgctatccctagactctgctgaaagcgatcaaattgtcaagtacaaa
gatcattggaatggcaccttggacctctcgaccatcttgatcgaaacttattttcgtcaa
gttatcgaggatccccagtgccatcgaatagcgcaagtggagcttcgatatcgagtggtt
ggaacggacctttggaatattgtcaaatcaatggatatctttaataagttaaaggaagag
ataactggcttggatatttgtttcgaatatgaagtggcgctggaactgattgggacaaca
ggaacggaatccaccacggtgaatttgggtcgcattggtcctcccagcaacgatgtcatc
aaaagtgcaatggcgtcggggtttagttatgagcccccttcagcccaagacatcagtgca
tccgagatctttgcaacttccactgtgctccgttggaccatgcccaattcatgctttcat
ggtgtaaacgtgtctttggtgtcatcgttctcgggtcaacttgttcaagagagggatgag
gcaggtcgttcatcagcgcttagcccggtcgttgcgagccagacagtaatgacaacctca
ttggaagatctcactccttgccaggattacactgtcttactcgagtcatatttcactgtt
gacctgggggaggggctcttttataggtcagcgcctaatagtttacctgaaattcagttc
atcacccgaccagatttttctgacgaacatacccaatttgccataaccagcctgaggagt
aaacgtagaggaagctcaatgagtctatcctggaggaaaagtgaatggccatgccttggg
ccaaaacattacaacgtctggatttgctcaaaacagtccacgaatcagagctcatcccca
tggtccgatgcaaaatcatcagagtctctttttgaagaggtggaggaagacgacggcgat
gatgatgatgatcatcatgatgacgaagaagaagaagaaggggaggacgaggatgagaat
gagatcggagatgggcaagaaaggaaggaggagaagtgtctagaaagtcaagagatcatt
tcagacggaaagaacatggcggtcaagtttcaaggcgtagacacatgcaacactctgaag
attcggataggggttaacatgaaggatgagttgacggatgaagccgaaagtaccaatctt
cctgaatatatggacattgacacatcggttgagttggaccaatcaaaatggacatttgag
acggtcttggtgtctaagaagtcggttgaggctcccaaaggattgactctgttttcagta
tcagatcacacggtcacaatccgctggcgtgtggattcttgcgccacgtcatatctggtt
tccttgtcaaccggctccaagagttggaaaggcgaatttggagccaaaacttcacatttg
ttagcggccaatcaggttcataaagtactcatggacgtcatggacggatccacgagcgaa
gacaacatgtcagctaatgattcggacaccagtttatacgattcaagttcatatgaagac
gacgaagcccacgaagttctagctcgcaagaaaagagatttttcggaacaaatgcttgcg
tatgattatgaagcagatttgatagcagaaaacccacatatgcaagggtcaagcttcact
caagataattctataacatccttggatgtggatgatgaagactactccgatgaagaagga
tctggatctggatctggatctggatctggatctggagatgatgccccagtggaagatttg
acgaaggcagagaacctatccaaacacatcattgttgatgatgacaatcccataatggct
gaattcaaaattcaagacctccaaccgtgcacggactacgtgattcaagtgatgaatttt
tacaccattgatgggaatgacatatttggcccaccatccaaaatacaggcccaaactcaa
tgtcccgaaggggaacccgccacaacagtaggcccattttccagtacgtctatctccatt
caaccagaagaaaccacattcgaagctcatgcggatgaaaccacatactccccattgatc
ggtgaaactactgatgacaatccagtccaagttaccacaactaaaactccttttgaagac
ccatccatcaccacaatgaatagccccacaaccacaattcaaaccactccgacgtatgaa
attaccactagttgggaatatcttctagaagacagtttggacagtaccacagaattagaa
gcaacaattacagcaaccaccaccactactaccaccaccaccacttccagtactacaaca
agcaccccaactacaaccacaaaacccatgatccctttcattggattcgaagtttctgaa
aattctaacggaacgttttcggtagtttgggaacaagccactgacatccaagcagagctt
gagattcaaagtacaaatggaaccaatgctatatacaagtttgaaaggagctctaacccc
ggcacttatttgcggcaagagcaggccttgaatttgcaaccttgctcgatatattatatt
atcctctacgagcgtaactctgacggtgaagttactgagttctggcgtcataccgttcaa
gtcactcctaatcctgatttagagttcgaactggccagtccacaaatcgtagtgagtaaa
aacgtaagctcgggcaaaggaaacgtcagatttgaatggactcattcacaagattgcatc
aaggcctacgtgatcaccttatcccaagacgacctctttggtatcactgaggtagaacca
aaagcaataggcgagagcatttcaattgatttgcatatgatgcctggaaatctgaccctg
aagaattgtcacaaatatctattgacaattcagccccagaccgaagcagaaattgaggag
ggagccttatggcagaaaggttactccaaaccctttcggtacatgttagcggatgatgga
gcccccaatgatgttcaagataagatttcaatcacaccaacgtcgtttcaaattgagctg
agttggcccgaacccctttcctgcaaagaaatgaccctgtccgtggctagcaatcgtcat
atttacaacgaccatggccacacgcaattcattcatgccacagacatccccatcttctcg
gagcgctacatcatttccgatctgcggccttgctttgactacaaactgattctttctgtg
gacgatggaatcctgttggataaaacaatcagcactataaagaatgaaacagtggtggaa
gagcttaatgcacaagaggttgctatttggaaggaagaccaagatccaactcaagtcaaa
gtcgaatgggcctcacgatgtgtagagacattctcattcgaatattgtcgatttcccacc
gggtgcattaaagagacgggcagggtaacccgtggggtggccctaatcgatttatcagtt
ttgccgagcattacacttgaggccctgatcccatgtcaaatgtatcgctttgagattgac
acctcactcatcggtcaaatctatgaggggaatttcacgacccatttctccgacggactt
gcattcgattttccagaatttcactttgagttcaggaatgatccaatccacgtcacttgg
gaacatgtctatccttgcgtggacaaatatgacattaatttgacttctagcaacggtaca
actctattatctacaaaaattcaaccagacactctgggatccattagctttgacctttcc
ataaacctagacgagagtgggtcacaactcgatcaatgtagcaactacactctacaaata
attccaagattaacagcaaactattccagcactacttgggaaagtcgaagtatgcgacaa
gtggaatttctatttctctctgaaacgcccattccgactagaatttctcatctggtcaat
gagagtggtgcccatatttcttggccgggttcatcatgcttgagtgcctatattttagtg
ctaaccgatgcacatgggaacaaattagtcaacaaaacgttggcagacaactcaacctca
attccaatgaacgctttgaaacattgcactcaataccatatcaaaatatggagcatatcg
gaattgggaaagtcggatgatcatgcctcttccgaattcatgacagatcacccggatgag
atccttcttcatcacaatgcttcttacgagtcgattgaggttcgagccgagctccatggc
atggattgcgtggatcactacaaggtgtttctttgttccgtggaaaaagtgcaatgttgg
gatcagtcgctatcctcagatcaagaaaacatggtggtctttgaaaatctgactgagggt
tctccgttggtgattcaattggtgggatacaacaccagaggccaggagttgtatttctct
tcagagaaggtggttgaaacccgacatcgcatcaaggccactttgaaagagggacaagtt
acggaacattcagtccaatttaccgtagaatcctccttttttgaatcaggactcgactcc
cggcttgagtggtgggtggaggtgtcttgctctcacaaagacgaaactttgatcagcaaa
ggggctcataagacaatcaaattcacggatttggatccttttactatggtcttatgctcg
ggaacattttataccgaacaagaagaggaagatatgggatcagtttggatcaaaacaaac
caagctgcccctagctctccccaggatttgaggatcgagctcgtcaattccactcagatc
gtgattcaatggaatggccctcaatcagttcctgggataatcgaagactatgaattgact
tacaactacgaatgcaaaccagactcttcgtgcgccgataaagaatgtggccgacagaat
aatcataccatccaaggagatcaatcttttttgcaattgactgtgaaaccatttcgaagc
tatgtttttgatgtaagtgccaaaacaaaacacccgagtaggggtccgaaccatggacca
atcacttttgagacgcccagtggccaacctgcacccgctacgcttaggaagctcgagaaa
ctatcgagcgattctgtcctcatcgagtttgaagagggctgtccgattaatggggaagtt
gggcacgaggtacaatggctttgtaatggttgcaaaatgcctccccaaccctcggtgaag
atccatcacgatttgtcagtggaggtctcgaatcttcaaggaggttatttttatgatttt
tggattgaatccagcactcgagactgtgctgatagtaattgcacggcttccagcgaagcc
aaagtcgtttatcttgattgcgaatatcaatgccgcgatggaacctgcatcaatcgaggt
tggaagatcaaatgtgactttgttcgcgattgccctgatggaagtgacgaggagggatgc
acttgcgatccaccgttcaaattcgaatgtagcaacaaacattgcgttgagtcgtggcga
cgatgcgacgggaacgcggattgcaacgatttttccgatgaagccaattgtcccacttgc
cacgacaaccagtttcgatgcgagggaacccaagaatgtattgctaaaaacatgacttgc
gatcgaatggttcaatgtcgcgatggatcagatgagaaaggatgtgcatactggacctcc
agttgttggcctgataaattcaggtgcttggaccacacctgtatagatattcgacatcga
tgcgatgggatctgggattgcgtcaatggagaggatgagctttcgtgcaacaccatttgt
gacaaggtcgacgagtttgcttgtaagaacagagagtgcatcccacatggccagtactgc
aatggacagaaagattgctcggatgggaccgacgagctctttgagtgccactgccataaa
aatggacaattcgcttgcgtgtccggcaatgagtgtgtaccaaggctcaaagtttgtgat
gcgacgttagattgctccgatggatctgatgaaagaggctgtggagccaaaaaatcatcg
ttgccaaccaatcctgttaagtctccggtcaatctcgacgctgagagtgtctttgggacg
agacatgagatcagcaatgaaaacggaccagacacggttctagctgatgcactagaattt
gctgaacaagcacaacaggacagtgcagaaaatgctttcgtggactactccgagatacgg
ccgcttttccagccatccttttacgagactggctttgaatcagccaatcaggttaaggag
aagtcgaagtataacctcaaggtatatcctcaagtgcaagaggtttatgaaggccatgat
gtggtattgcaatgtagagatgaaggcgatctcagggccccagtcgtttggaagaggccc
aacgggaaatctctgcccaagccatcccaccaggaatttggcagattggagataacgtca
atcttccgttttcaagagggatcttacttgtgtgttgtggaaaatgacccgaaccattca
gagggccaagctaaggccgaggtgaaggttgtaacctatcctgctcgcagtcaaaatgct
ctgtga
DBGET
integrated database retrieval system
