Tigriopus californicus (tidepool copepod): 131882586
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Entry
131882586 CDS
T09700
Name
(RefSeq) multi-drug resistance efflux pump PmrA homolog
KO
K12307
MFS transporter, DHA1 family, ceroid-lipofuscinosis neuronal protein 7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131882586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131882586
Transporters [BR:
tcf02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
131882586
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
AmpE
Motif
Other DBs
NCBI-GeneID:
131882586
NCBI-ProteinID:
XP_059085761
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All DBs
Position
6:complement(12735486..12742590)
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AA seq
471 aa
AA seq
DB search
MNFYTKRRCSFVVIFLYTFFNGVEYAVVFPTLWEYLQSLGVPSSDVYLLGACISAVTVTD
MFASLVVGRLLDCFTRVSWFILTLNLFQIVSGLIYGFASSSAWILVSRLIAGVGNVASVA
LMTDVTRATSREERTSVLVSFSIAQQVGLLFGPACNLFIRKVSFTLFGFEVNKLNGPGFF
LATMYFVFEFVVLFMYYDLAKEYAKEQKRITEESIDESLEVNLAPRDEVTTQILDPNISW
AEYKNELFRAEIVALVFLRFIGLFGQTCLEAVLTPMMMTFFNYSDFENSILYLLGGLELL
VVSILMAIISKKVSDRSFITFGIFISIVTYVWMLIFIPRFQPGDRSNLGLFGVGFILDLI
GIPILLDIALSLLTKLVRDEVQGLATGIRRFCSNIALLLGPLWGSGALPYLNTLFILPLA
LLVVAAIMFAHSYRSLYVRPSVTSTTRLATGDNDSSEGEEILSERTPLIQA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctatacaaagagaaggtgtagctttgtggtgatctttttgtataccttcttc
aatggggttgaatatgctgtggtgttcccaaccctttgggaatacctccaatcattaggg
gttcctagttcagatgtttatctcttgggtgcttgtatatcagctgtcacagtcactgat
atgtttgctagcttagtggtgggtcggctcctggattgtttcacccgagtctcttggttt
attctcactttaaacttgttccaaattgtatctggtctcatttatggctttgcaagctcc
tctgcatggattttggtcagccgattaattgctggcgtgggtaatgtggccagtgtagct
ttaatgacggatgtgactcgggctacatccagagaggagcgaacttcagttctagtctca
tttagtattgctcaacaagttggattattgtttggtccggcttgcaatttgttcattcgg
aaagtttcctttacacttttcggatttgaggttaataaactcaatggccctggattcttt
ctagccaccatgtactttgtatttgagttcgttgtgttgtttatgtactatgaccttgcc
aaagaatatgccaaagaacaaaagcgaatcaccgaagagtcaattgatgaaagtttggag
gtcaatcttgcgccaagggacgaggtaaccacccagatcttggacccaaacataagttgg
gctgagtacaagaacgagttgttcagagccgaaattgtggccctggttttcctccgattc
attgggttatttggacaaacatgtttggaggctgtgcttactcccatgatgatgacgttt
tttaactattccgattttgagaatagtattctatatctattgggtggtttggaactgctg
gttgtatccattctcatggctattatctctaagaaggtgtccgatcgatccttcataact
ttcggaatcttcatcagcattgttacctacgtgtggatgctcatctttattccacgattt
caacccggggaccgatccaacttgggcttgttcggtgttggtttcatcctggatttgatc
ggaatcccaatcttgttagatatcgccctgtcacttctcaccaaactagtcagagatgag
gtgcaaggattggccacgggaattcgtcgattctgtagcaatattgctcttctgttggga
cctttatggggaagtggagccttaccctacctgaacaccttgttcatcttgcccttggca
ttacttgttgtcgctgcgatcatgtttgcccactcttatcggagcttgtatgtgaggcca
agtgttacttctaccacaagattagcaacgggcgataacgattccagtgaaggagaggaa
atcctctcagagcgaacaccattaattcaggcctag
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