Tigriopus californicus (tidepool copepod): 131882617
Help
Entry
131882617 CDS
T09700
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131882617
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
131882617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
131882617
NCBI-ProteinID:
XP_059085794
LinkDB
All DBs
Position
6:complement(11971420..11974291)
Genome browser
AA seq
601 aa
AA seq
DB search
MSAPTTPGGGVGILRRRSHEESPNRSASPRRSGVHFEPPPNLGEILVKYNQGGNNVIELE
GFITHMRNQRGTALIAWLQSLQENIVHLKPKLEHFVLSTLHIPWIGQEKAVVSAFKHFLA
NLVSAHSFYTKPITQMLLRNFNSKAKSDEELDQEKLVFVNTHEALRGILAVAPLGAKQSI
LHYVKVTMPFMLIRIPSVHTKYIENIIHLTGYLGSEEERVAILRIVVDRLVQLDAYLPKM
NEYEEEDDNEENEEELFPLERPAVTQLSDAEIARVNLDQAMVVMFQYITQRYESGDALPL
YSDLLRVFELYILPTYATGHVQFLLFHFLTLDASRKFTVCFLDWLWRKFQSPNTPQIIRQ
STIAYMASLMARGKHVDIDQAASYLEKIVAWIHAYIGARDGGAQSAHDYKYVDPKAHGPF
YAACQSTFYLFAFRHQEFVQSEKWLVFLRGLNFSTIVTANLNPLRVCLPPVVKNFAAIAR
HYQLVYCDTIIERNNRINLPIVGGLSSLGTGEGKPVLLDSFFPFDPYMLKLSKEFVTSNY
RVYQGAMIESDIEDSDEEDEGEPEDMDVTDILGSLPKTPSALHDQNVLNQFMYGSSPGFK
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccccaccacgcccggagggggcgtgggaatcctccgtcgtcgctcccacgag
gaatcgcccaatcggagtgcatcgcccagaagatccggggttcattttgagccgcctccc
aacttgggcgaaatcctggtcaagtacaatcagggcggaaacaacgtgatcgaactcgaa
ggattcatcacgcacatgcggaatcaacgaggcaccgccctgatcgcatggctccagagc
ctgcaggagaacattgtccacctgaaacccaaattggagcactttgtcttgtccaccctg
catattccttggatcggtcaggagaaggcggtggtatcagcattcaagcacttcctagcc
aatctcgtctcagcccacagcttctacaccaagcccatcacccaaatgcttctgaggaac
ttcaactccaaagccaaaagcgacgaagagttggatcaagagaaattagtctttgtcaac
acgcacgaggccttgcggggaattttggcagtggctcctctaggggccaaacagtccatt
cttcattacgtgaaggtcaccatgccgttcatgctcattcggatcccgtcagtccacacc
aaatacatcgagaatatcatccacttaacgggatacttgggctctgaagaggaaagagtc
gccattttgcgcatcgttgtcgaccgtctcgtccaattagacgcttacctcccgaaaatg
aacgaatacgaggaagaggacgacaacgaggaaaacgaggaagagctctttccccttgag
agacccgcagtaacccaactctcagacgctgaaattgccagagtgaacctggatcaagcc
atggtggtcatgtttcaatacatcactcaacgctatgaatccggcgacgcgctcccgctt
tattcagatcttctgcgcgtttttgagctctacatcctgcccacttacgccacgggccat
gttcagttccttctattccatttcctcaccttggatgcctcccgtaagtttaccgtctgt
ttcctggattggttgtggaggaagttccagagcccgaacacgccccaaatcattcgtcag
agcaccatcgcctacatggccagtctaatggctagagggaagcacgtcgacatcgaccag
gcggcctcttacctagagaagattgtggcgtggattcacgcctacatcggggctagggat
ggaggcgcccaatccgcccatgattacaaatatgtggaccccaaggcccacgggccgttc
tacgccgcctgccagtccactttctacttgttcgccttcaggcatcaggaattcgttcaa
agtgagaagtggctggtcttcctgcgcggattgaacttttccactattgtgaccgccaat
ttgaacccgttgcgcgtgtgtttgccgcctgtggtgaagaattttgccgccattgcgcgc
cactatcagttggtctactgtgataccataatcgagcgaaataatcgcatcaatttgccc
attgtgggtggactgagctctttgggaacgggcgagggcaagcccgtacttttggattcg
tttttcccgtttgatccgtacatgttgaaactctccaaagagttcgtcactagtaattac
cgggtgtatcaaggcgccatgattgagagtgacattgaagatagcgatgaagaggacgag
ggtgagccagaggatatggatgtcacggatattctaggcagtctcccgaaaaccccgtca
gccctgcatgatcagaatgttttaaaccaattcatgtatggatcttcgcctgggttcaaa
gtctag
DBGET
integrated database retrieval system
