Tigriopus californicus (tidepool copepod): 131882710
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Entry
131882710 CDS
T09700
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131882710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131882710
Spliceosome [BR:
tcf03041
]
Complex A
Other components
Complex A specific factors
131882710
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC_3
zf-CCHC
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
131882710
NCBI-ProteinID:
XP_059085930
LinkDB
All DBs
Position
6:9178981..9181115
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AA seq
576 aa
AA seq
DB search
MTIVEMSLPETSELKAITINGCILVESKEDEAKRAARRRARKSRWETSSSSQDPPKKKLC
SVLLSGELGSNPNHSAPQVSTDNSKIPGNTLSTMIDTSQMSEKEQQIYVLRLQIQEATLK
LSQPNYGIPPNPRDRSPSPEPIYNNKGIRINTREDRTKSRLIQQRNAAITKIKEIDPTYQ
PPSAYKYKNLDLEDRVMIPADEHPHINFMGLILGPRGRSLEELSKRTNCQIIIRGKGTLK
SGMTGILKSGTKVEAMEDPMHALIKGQTAEDVKKAVKEIEDIIHLQIYQPDSEKAVALRA
KTMHDLAVLNGTLRDIDLKCLNCGKWGHNAWECSEGSNFTSSVICSACGGIGHVTSDCRQ
RRPGALFNQTKGKKDSNQIDSEYEHFLTDMGFDPKKESKKDDKYAPPVGDLSKVGAPLML
TYGSGASGAASAHSRAVSAGQCPGGSLTALGKSIFGGKLTRMTAGFKSHDEREMERLKKV
DEWHNRPIPMEWQVEKMEKEMINQNEQYMRHLKLQAQAEKQRKQFQSYQFTAPPPPPGAP
TFSSSADSPKMNPESVVPPEDLPDLQHDPFSGFKRL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtcgagatgagtctaccagagaccagtgaattgaaagccatcaccatcaat
ggctgcattctcgttgaatcgaaagaggatgaagcaaaaagagctgctcgccgaagagct
cgcaagtcccggtgggaaacctcctccagttcccaggatcctcctaagaagaagctatgt
tcagtattgctctcaggggaacttgggtccaatcccaatcactcggctcctcaggtctcc
acggataattcaaaaatacccggcaacactttatcaaccatgattgacacctctcaaatg
agtgaaaaggaacaacaaatttatgtcttgcgacttcaaatccaagaagctaccttgaaa
ttgtctcaacccaattatggtatcccgcccaatcccagagaccgaagtccctcccctgaa
ccaatttacaacaataagggtataagaattaacactagagaagaccgtacaaaaagccgt
ttgatccaacaaagaaatgcggctataaccaaaatcaaagaaatcgatcccacttatcaa
ccgccatcagcttacaagtacaagaatttggatctcgaggatcgcgtcatgattcctgcc
gatgaacaccctcatatcaattttatgggattaatcttgggtcctcgcggtagaagtctc
gaggagctgagcaaacgaaccaattgtcaaatcattattcgtggcaagggcactttgaag
tcgggcatgacgggtattttgaaaagtggaaccaaagtagaagctatggaagatcctatg
cacgctctaatcaagggtcagacggcagaggacgtcaaaaaggcagtcaaagagattgag
gatatcatccaccttcagatctatcaaccggactctgagaaagccgtggctttgagagcc
aagacaatgcacgatttggcggtcttaaatggaaccttaagggacatagacctaaagtgc
cttaattgtgggaaatggggacacaacgcttgggagtgctctgagggctccaatttcacc
tcgtccgtcatttgctcagcctgtggtggcattggccacgtcacctcagattgtcgccag
cgccgtccgggagcactttttaatcagaccaagggtaaaaaagactcgaatcagattgac
tcggagtacgagcactttctcacagatatgggattcgaccccaaaaaggagtcgaagaaa
gacgacaaatacgcccctcccgtgggagatttatccaaagtcggtgctcctctcatgctc
acctatgggagtggtgcttctggtgcagccagtgcgcactcaagggctgtgtctgcagga
caatgtcctggcgggagtttgactgcgttgggcaagtcaatttttggcggtaaactaaca
agaatgaccgctggattcaaaagtcatgatgagcgggaaatggaaagactaaagaaggta
gacgagtggcacaaccggcccattcctatggaatggcaggtggagaagatggaaaaggaa
atgattaaccaaaatgaacagtatatgaggcatttaaaacttcaagcccaggccgagaaa
cagaggaaacaattccagtcttaccaatttactgcccctccgccacctccaggggctcca
acattctcgagttctgctgactctcctaaaatgaatcctgaaagtgttgtgcctcctgaa
gatctccctgaccttcaacatgacccattttctggatttaaacgattatga
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