Tigriopus californicus (tidepool copepod): 131882848
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Entry
131882848 CDS
T09700
Name
(RefSeq) netrin receptor UNC5C-like
KO
K07521
netrin receptor unc-5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131882848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tcf04515
]
131882848
Cell adhesion molecules [BR:
tcf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
131882848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPA
Unc5_NetrinR_N
ZU5
TSP_1
I-set
Ig_3
Death
TSP1_spondin
Ig_2
ig
TSP1_CFP_C
V-set
PRIMA1
YxzE
DUF3951
TPR_10
SRTM1
COX2_TM
Motif
Other DBs
NCBI-GeneID:
131882848
NCBI-ProteinID:
XP_059086156
LinkDB
All DBs
Position
1:complement(2304936..2337651)
Genome browser
AA seq
1032 aa
AA seq
DB search
MKAFVVFILLAFWCCGFVLESVSGEARRRPGRKKGSKNEFSDYDQDDLIPIPDHMLKNGE
VHYDDVDEGNDVDYIDHRVVSDKDDSSPHVSTEASSQSFGDGSLLPSVLPSTNLTQSALP
IFLKEPLDTFVTKSQTAEVHCRVAHALSVHFQCNSVQEKPTRLEHHVEPETGVRYIEATL
KINRDQVEEFFGDFHCACMAVSGKGPKISRHALITYAYLRKQFETPPYSQQVAVGSSVQM
RCLPPKGKPTPTVYWLRGDRRIDPDKDKNFLLSGDNHLIVVSAQTGDSGNYTCAAENIAS
TRYSDPATLTVFADGTWSLWSSWSSCSTPCGKGSQKRTRSCKVPKSGGQPCEGPPVQKRS
CGSPCNGQIDGNWAQWSSWSSCSPECFQHRRRTCSNPAPSANGRYCDGLDLESRNCSNGF
CQSDRKLVVYGQVTDAPPDVSSAQAQFDSNVVIYISCTVAILVFILLILIAIKVIRRKSP
NPNGYTLTSTDYGYGSDESKKTASLGYSPDIVGATIGAGGAITPTTVCYEYSYPDSNSNH
SKSGFVRPVSEHHYEQPMVVFPPNQSPADSIGKPTRSEASTSTTGSSSHGKGRSPQSTAT
FEGKRSISFPLASTPLPSSSDPKFTTWANVGHNGARVSLPDSNVFLTVPPGALPPGQTVD
LYLSVIHNVQHPQLLGRETLLAPLVICGPKDVSNKLKKPVILSLPHSASLRHGNWSVSVL
QNNDFNQEISSPGWHKIVTLGQETINTPVYAQLDLNMCHIMTDHLSAMTVTGESAKSGPA
MKGLRLASFAQEGFPASDLTIRIYCLPDTDDALNYVTEAERRYNGRLLDSPLSVLLQDGG
EPLCLKIEGLSSNWICQKGADYLEVPFHHIWNSCNPSLHCSFTFRCRSGSNRTKLHATIG
ISQRHVTSKSLLKINCDLSQRSIPPPQPPATLPHEQLSTNKFRLSQALIQMLSNLLDPPN
QQGTDWRLLAERLNVHRYVTYFATRPSPTEAILNLWEARNRELLAMSNLSNVLRGMGRFD
AANVLERDGGTC
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcttttgttgtgttcattttgttagcgttttggtgctgtggcttcgtcctggag
agcgtgtctggcgaggcgagacgccggccaggccggaagaagggttcaaagaatgaattc
agtgattatgaccaagatgacttgatacctattcccgatcatatgttgaaaaatggtgaa
gttcattacgacgatgttgatgaaggcaacgacgtggactatatcgatcatcgcgtggtt
tcggacaaagatgattcctcaccccatgtgtccaccgaggcctcatctcaatcatttggc
gatggcagcctcctgccaagtgttctgccctccaccaacctgacccaaagcgctttgcca
atttttctcaaggagcctctggatacatttgtgaccaaatcccagaccgccgaggtccac
tgtcgcgtggctcatgctctcagtgtccactttcagtgcaattctgtccaagaaaagccc
actcggttagagcatcacgtggaaccagagacgggggtgcgatacatcgaagccacactc
aagattaaccgtgatcaagtggaggaattctttggggatttccattgcgcttgcatggcc
gtgtctgggaaaggtccgaagatctctcgacatgctcttattacatatgcctatctacgt
aaacaattcgaaacgcctccttactcacaacaagtggccgtgggatcttcagttcaaatg
cgatgtcttccccccaaaggcaagcccacaccgaccgtctattggttgaggggagatcga
cgaattgatccggacaaggataagaacttcctactcagtggggacaaccatctgattgtg
gtgtcagctcaaaccggcgactctgggaactacacttgtgccgctgaaaacattgcttcc
acccggtatagcgaccctgccacgttgaccgtgttcgcggatggcacttggagtctttgg
tcatcttggtcgtcatgttctaccccttgtggaaagggcagccagaaaagaaccaggtct
tgcaaggtccccaaaagtggaggtcaaccctgtgaaggccctccggttcagaagcgctca
tgtgggtctccgtgtaatggtcagattgatggtaattgggcccaatggtcatcttggtca
tcctgcagtcccgagtgcttccaacaccgccgaagaacctgttccaatcctgctccctcc
gccaatggaagatactgcgatggcttggatttggagagtcgcaattgctcgaacggattt
tgtcaaagtgatcgaaaattagtcgtgtatggccaagtgaccgacgcgccccctgacgtg
tcttcagcgcaagcccaattcgactccaacgtggtcatctacatatcttgcaccgtggcc
atcctcgtgttcattctgctcatactcattgccatcaaagtgatccgacggaaatcgccc
aacccaaacggatacaccctcacgtccacggattacggttatgggtcggatgagagcaaa
aaaacggccagtttgggctattccccagacatcgtcggtgctaccattggagccggagga
gccatcacgcccaccaccgtgtgctatgagtacagctatccggatagtaactccaatcac
tccaaatcagggtttgttcgaccagtgagtgagcatcactatgagcagcccatggtcgtg
tttcccccgaatcagagccccgcagacagtattggcaagcccacccgctcagaggccagt
acttcaaccaccggaagcagttctcatgggaaaggccgaagtcctcaatccacagctact
ttcgaagggaagaggagcatctcatttcccctggcgtccaccccactcccttcctcgagt
gatccaaagttcaccacttgggccaatgtgggccacaatggggcacgagtctcactacca
gattcaaatgtcttcctgacggttcccccgggagctctcccacctggacaaactgtggat
ctgtatctgtcagtgattcataatgtgcaacaccctcaattgctggggcgcgagactctt
ctggcacctttggtcatttgtgggccaaaggacgtctccaacaagttaaagaaaccggtg
attttgagtctgccccatagtgcttctctacgtcatgggaactggtcggtgtcggtgttg
cagaacaatgatttcaatcaggagatttccagccccggatggcataaaatcgtgacgctt
ggccaagagactatcaacaccccagtgtatgctcaactggacttgaatatgtgccacatc
atgaccgaccatttaagtgccatgactgtgacgggggagtcggccaagtctgggccagcc
atgaaaggtctgcgattggcttcctttgcccaagagggattcccggcatccgacctgaca
attaggatctattgcctccctgacacggatgacgcgcttaattatgtcacggaagccgag
aggcgttacaatggccgactcctcgatagtccactgtccgtgctacttcaggatggtggc
gagcctctgtgtttgaaaattgagggcctcagctcgaactggatttgccagaagggagcc
gactaccttgaagttccgttccatcacatttggaactcttgcaatcctagtctacattgc
tctttcacatttcggtgccgctctgggtcgaaccggaccaagcttcacgccaccattggc
atctcccagaggcacgtgacctccaagtctctacttaaaatcaattgtgatctcagccag
aggagcatcccaccccctcaacctccggcaactttgccccatgagcagctctccaccaac
aaatttcgattatcccaagctctgattcaaatgctctcgaacctattggatccccccaat
caacaaggaactgattggcgcttgctcgccgagagactcaacgttcaccggtacgtgaca
tactttgccacgcgaccaagtcccaccgaggccatcttaaacctttgggaggcccgcaac
cgagaacttttggccatgtcaaatttaagcaacgtcctccggggcatgggtagattcgat
gctgccaatgttttggaacgagacggaggtacttgctaa
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