Tigriopus californicus (tidepool copepod): 131882851
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Entry
131882851 CDS
T09700
Name
(RefSeq) heat shock protein 60A-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131882851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131882851
03110 Chaperones and folding catalysts [BR:
tcf03110
]
131882851
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131882851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131882851
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
131882851
Messenger RNA biogenesis [BR:
tcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
131882851
Chaperones and folding catalysts [BR:
tcf03110
]
Heat shock proteins
HSP60 / Chaperonin
131882851
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
131882851
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131882851
Exosomal proteins of other body fluids (saliva and urine)
131882851
Exosomal proteins of breast cancer cells
131882851
Exosomal proteins of colorectal cancer cells
131882851
Exosomal proteins of bladder cancer cells
131882851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
131882851
NCBI-ProteinID:
XP_059086142
LinkDB
All DBs
Position
6:complement(2834759..2840669)
Genome browser
AA seq
645 aa
AA seq
DB search
MDWKAFHHAQAEFRVVRLSLPLWGVDLVLVSQSGQLSRVDSAKKVCVQPVIRCLFIFSPV
SPMYRAALNAVGRGLTPLSARPLGGSGWGVRGYAKDVRFGSEVRKEMLIGVDILADAVSV
TMGPKGRNVIIESSWGSPKITKDGVTVAKGIELADKFQNIGAKLVQDVANNTNEQAGDGT
TTATVLARAIAKMGFDSVTHGANPVEIRRGLLAAVDHVNQQLKEMSKHVTTPEEVYQVAT
ISANGDTTVGKLISDAMNKVGKEGVLTVKDGKTLHDEMEVIEGMKFDRGYISPYFINTTK
GAKVEYNDALVLYSEKKISSIQSIIPALELANQSKRPLIIVAEDIDGEALTTLVVNRLKI
GLQVAAVKAPGFGDNRKNTLQDMAIASGGVVFGSEGTDLKLEDIQAHDFGQVGEVSITKD
DTLFLKGKGREDEIAKRVQQLKDQIEDSSSEYEKEKMQERMARLSSGVAVLKIGGSSEVE
MNEKKDRVNDALCATRAAIEEGIVPGGGTALIRCIASLDGVKATNADQKKGVEIVRYALT
RPCYQIAKNAGVDASVIVNKVKEAQDLNTGYNAAENTFVNMIEAGIVDPTKVVRSALTDA
AGVASLLTTAEAVITEIKEDAPAGGGGMPGGMGGMGGMGGMGGMM
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggactggaaggcatttcatcacgctcaagccgaattccgcgtggttcggctttccctt
cctctgtggggtgtcgacctcgtgttagtcagtcaatctggtcagttgtctcgtgtggac
tctgccaagaaggtgtgcgtgcagcccgtcatccggtgtttattcattttctcacccgtt
agtcccatgtatcgagcggctttgaacgcggtggggcgtggcctcacgccgcttagcgcc
cggcctctgggcgggagtgggtggggcgtgcggggctatgccaaggatgtgcgttttggg
agcgaggtgcgcaaagagatgttgattggcgtggacattttggcggacgccgtgtctgtg
accatgggacccaagggtcggaacgtgatcattgaatcctcttggggttcgcccaagatc
accaaggacggagtgaccgtggccaaaggcatcgagttggccgacaagttccagaacatc
ggcgccaaactcgtccaagatgtggctaacaacacgaacgagcaggccggtgatggcacc
accacggccaccgtgctggcccgcgccattgccaagatgggcttcgacagtgtcacccac
ggagccaaccccgtggaaattcgccgcggtctcttggctgcggtcgatcacgtcaaccaa
caactcaaagaaatgtccaaacacgtgaccacaccggaggaggtctaccaggtggccaca
atttctgccaacggcgacaccactgttggcaaactaatctcggacgccatgaacaaagtg
ggcaaggaaggcgtgctcaccgtcaaggatggaaaaacgctccacgacgagatggaagtc
atcgagggcatgaaattcgaccgcggctacatttccccatatttcattaacaccaccaaa
ggtgccaaagtggagtacaacgatgcgttggtcttgtactcggagaaaaagatcagctcc
attcaatccatcatccccgccctcgaattggctaatcagtccaaacgccccttgatcatc
gtggccgaagatatcgacggtgaggccctcaccaccctggtggtcaatcgtctcaagatc
ggccttcaagtggccgcagtcaaggcccctggtttcggcgataatcgcaagaataccttg
caagacatggccatcgcctccggaggtgtcgttttcggctcggaaggcaccgacctcaag
ctcgaggacatccaagcccatgactttggtcaggtgggcgaagtgtccatcaccaaggac
gacacgctcttcctgaagggcaaaggccgagaagacgagatcgccaagagggtccagcaa
ctcaaggatcagattgaggactcgagctccgagtacgagaaggagaagatgcaggagcgt
atggctcgtctgagttcgggtgtggccgtgctcaagattggcggctccagcgaggtcgag
atgaacgagaagaaggaccgcgtcaacgacgccctctgcgccacccgggccgccattgag
gaaggcatcgttccggggggtggaaccgctctcatccgatgcatcgccagcttggatggg
gttaaggccaccaatgccgatcaaaagaagggagtggaaatcgtccgatatgccctgact
cggccctgctaccaaattgccaagaacgccggagtcgacgcctcggtcattgtcaacaaa
gtcaaggaggcccaagacctcaacacgggttacaacgccgccgagaatacctttgtcaac
atgatcgaggccggtatcgtcgaccccaccaaggttgtgcgctccgccctgaccgacgcg
gctggtgtggcgtctcttttgaccacagccgaagcagtcatcacggagattaaggaagat
gcgccagccggtggtggtggtatgccaggcggcatgggtggtatgggaggcatgggaggc
atgggcggaatgatgtaa
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