Tigriopus californicus (tidepool copepod): 131882888
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Entry
131882888 CDS
T09700
Name
(RefSeq) S1 RNA-binding domain-containing protein 1-like isoform X1
Organism
tcf
Tigriopus californicus (tidepool copepod)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
S1
Tex_N
YqgF
HHH_7
Tex_central_region
HHH_9
RuvC
HHH
S1_2
S1_RRP5
RNase_II_C_S1
DUF4252
Motif
Other DBs
NCBI-GeneID:
131882888
NCBI-ProteinID:
XP_059086152
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All DBs
Position
7:3667030..3672061
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AA seq
772 aa
AA seq
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MPPKRVKKETAIAKPCQSDVTPPKRAKLIDKALPLGKTFQWSPVDVIAEEFCEGDVALSD
TICSMFVEGCSIPFISRYRRECTQGKMPDELRNMQEAFSQLELVQSKALTLAQTLSKDPK
VTPKVIENIGRAKTIDQLSIITAPFTKGSSKTLAEKAKELGLEPLASSVMKREDFNLTQF
IKPQVEGLQTRANVQENLVQIISNWIGHSTKVLELTSRLESYQGAKVVSSKARATKAAEA
KKLAAKVDEDKYENYLAFKKDVCFVDTHQVLALVRGQKQKVLSVKIELPPQVEQHYIKFC
SKMFGGNSQSQDFRIETMGLAINDSYDRFAKGRMIRNIWSKLTDKAQKDSIEVFCKNLRQ
LLLMPSCPNTIILGLDPGYRQCKYAVISETGEIVDYGVFRFTFPNVPQRVLDQFVEVVND
HSVTLIALGNGTACRETEKVVSDVIQSGEINEDLEIKYSIVNEQGASIYSCSKLAMDEHP
GLDPLYISAASIARRVQDPLSEYVKIEPKHLGIGMYQHDLSEAKLKKNLEEIMTECVSFA
GVDINFASCHVLEKVAGLSKKIASDIIKWRESNKGFTSRKELNSIKGIGPKTFEQCAGFV
RIFPNRGERPNLDAYLIHPESYELARSIIKIQDLSESQLGSQKFQDHFKALMTHDSMMKR
IAQALNKDLSTIELIVEAFSQPLRFDIRDTMDKPVFKTGVRSVQDLKVGAQLQGVVSNVT
NFGAFVDIGVSRNGLIHQSQMMKKELALGQKVTVMVLSVEPERGRIGLKLLA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaaacgtgtgaaaaaagagaccgcaattgcaaagccatgtcagtctgatgtc
acaccccctaaacgtgccaaactcatagacaaagcattgcccctagggaagacctttcaa
tggtcacctgtggacgtgatcgccgaagagttctgcgaaggagatgtggccctctccgac
acaatttgttccatgttcgtcgaaggttgctcaattccatttatctcccgataccgacga
gaatgcacccaagggaaaatgccggatgaacttcgaaacatgcaggaagcattctctcaa
ttagagttggttcaatccaaagctctgacattggcccagacgctttccaaggatcccaag
gtgaccccgaaagtgattgaaaatattggaagagctaaaaccatcgatcagttgagcatc
attacagctccttttaccaaaggatccagcaagactctggccgaaaaggccaaggaattg
ggcttggaaccactggcaagctccgtcatgaagagagaggatttcaatctgactcagttt
atcaagcctcaggttgaaggtctgcaaactcgcgccaatgtccaggagaatttggtccaa
atcatttccaattggattggccatagtactaaggtccttgaattgacctcgagattggag
tcatatcaaggagctaaggtggtcagttcgaaggccagagcgaccaaggctgctgaggct
aagaaactggcagccaaggtggatgaagacaaatatgaaaactacttggcatttaagaag
gatgtgtgcttcgtggatactcatcaggtcttggctcttgttcgaggtcagaaacaaaag
gtcttgtccgtcaagatcgagctgccgccacaagttgagcagcattacatcaaattttgc
tccaagatgttcggagggaactcccaaagccaagattttcggatcgagacaatgggtttg
gccattaatgacagctacgatcgcttcgccaaaggtcggatgatcagaaatatctggtcc
aaactaactgataaagcgcagaaagattcgattgaagtgttctgcaagaatctaaggcaa
cttcttctcatgccatcatgtccgaatactattatcttgggcttggatccaggatatcgg
caatgtaaatacgccgtaatcagtgagaccggtgaaattgtcgactacggcgtgttccgt
tttacgtttccaaacgtccctcaacgagttcttgaccagttcgtggaggtagtgaacgac
cacagtgtgaccctgatagctcttggcaacggcacagcgtgtagagaaaccgagaaggtc
gtgtcggacgttattcaaagcggtgaaattaacgaggacttggaaatcaaatactccatt
gtcaacgaacagggtgcctccatttacagctgctcaaaactggcgatggatgagcatccg
ggcttagatcctctttacataagtgcagcttccatagctcgacgcgtgcaagatccgttg
tccgaatacgtgaagattgagcccaaacatcttggtattgggatgtaccagcatgacttg
tctgaggcaaagttaaaaaagaatctggaggaaatcatgaccgagtgtgtcagtttcgcc
ggtgtggatattaattttgcatcttgtcacgttttggaaaaagtggctgggctatcaaag
aaaattgcaagcgatatcataaaatggcgagagagcaacaaggggttcacatctcgaaag
gagttgaactcgattaaaggaattggtccgaaaactttcgagcaatgcgctggatttgtt
cgcattttccctaatcgaggagaaaggcccaatttggacgcatatttgatccatccggag
tcctacgagttggccagaagcatcatcaagattcaggacctctcggaaagtcaacttgga
agccaaaagtttcaagaccatttcaaggcattaatgacgcacgacagtatgatgaaacgg
atcgctcaagccctgaacaaggatttatccacaattgaacttatcgtggaagcattttct
caacccttgcgattcgatattcgtgataccatggacaagcccgtttttaagacaggagtc
aggtccgttcaagacctaaaagttggagctcaattgcaaggtgtggtcagcaatgtcaca
aactttggcgcattcgttgatattggcgtttctcgaaatgggttgattcaccaaagccag
atgatgaaaaaagagctggctttgggtcaaaaagtaactgtaatggttttaagcgtggaa
cctgaacgaggccgaataggactgaaactactggcttga
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