Tigriopus californicus (tidepool copepod): 131882975
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Entry
131882975 CDS
T09700
Name
(RefSeq) meiotic recombination protein SPO11-like isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131882975
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
131882975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Arc_capsid_dom
DUF6136
Motif
Other DBs
NCBI-GeneID:
131882975
NCBI-ProteinID:
XP_059086269
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All DBs
Position
7:3320111..3321794
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AA seq
487 aa
AA seq
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MAAPGSSPFHIPSSPHSDSGASLDRILGVDSECGDDDSVQLSDSIETFLDASEIEVKFAP
SEHIPGTSSPIHSSNKDHSFNDSQVEIELALTDHVLGTSSPVHSSEASWPDILDALKVQT
VHFQTHFPPMVCPWTFMSHEERYQRVVGQIEGLLLSQIQNGMVQGDAPLGFTYPDYSDWS
QVQYHPGYGLRPNLSASRMITTRLENRGSATKYSLIVLTLWSILELFDQDSFVTKRELYY
QHINHYRSQVAVDECVKVIACMLRIPRLHLRILSTSKGLFMGNIVFHNAQGIQVIGSHAT
PIPQDITGISQLASDAKFILVVEKDAVFQRLADDNFAVIYQPCLVITGKGVPDLNTRQFL
YHLWTHLKIPVLALMDGDPFGLEILCTYRFGSLPMTWSQELLPVPIMKWIGIFPSDIHQF
SREHLKPLSKVDCAKIRSLLQRPYVEAHPELKQEILIMKDHGWKAEIEAVDSVGDFVIRQ
ILSQHWR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctggttcctccccttttcatatcccatcctcgcctcactctgactctgga
gcaagtttagatcgaatattgggggtcgattctgagtgtggtgatgatgattcagtgcaa
ctctccgattccattgaaacgtttcttgatgctagtgagattgaagtcaagtttgctccc
tccgaacacattccgggcacttcatcgccaatccattcttctaacaaagaccattcattc
aatgatagccaggttgaaattgaacttgccctgaccgaccatgttctgggcacttcatct
ccggtccattcttctgaagcgtcttggccagacatcttagacgcattaaaagttcaaacc
gtccactttcagactcatttcccccctatggtctgtccttggaccttcatgagccacgag
gaacgttaccaaagagtggtgggacaaattgaagggctcttgctctctcaaattcaaaat
ggaatggtccaaggagatgcacctttaggtttcacttaccccgattactcggattggtcc
caagtgcaatatcaccctggatatggcttgcgacctaatttaagtgcgtcccgaatgata
acgacacgtttggagaaccgtggatcggctaccaagtattccttgatagtgctaaccttg
tggtccatcttggaactctttgaccaagacagtttcgtcaccaagcgggagctctactac
caacatatcaaccactatcggtctcaggtcgccgtggatgagtgcgttaaggtgatagcc
tgcatgcttcgaattcctcgccttcatctaaggatcttaagcacttccaaagggcttttc
atgggcaatattgtctttcacaacgctcaagggatccaagtgattggatctcatgccacg
ccaattccacaagacataactggtatttcacaactcgcctccgatgccaaattcatacta
gtcgtcgaaaaagatgcagtgttccaacgattagctgatgacaattttgccgtgatttat
caaccctgtctcgtgatcacaggcaaaggggtaccagatttgaatacccggcagtttttg
taccatctttggactcatttgaaaatcccagtattggccctgatggatggggatcccttt
ggcttagagatcctgtgcacttatcgattcggttcgttacctatgacgtggagccaagaa
cttttgccagttccgatcatgaagtggattggcatatttccgtcagacatacatcagttt
tcccgtgagcatctgaaacctttgtcgaaagtggactgtgccaaaataagatctcttcta
caaagaccctacgtagaagctcatccggaattaaagcaagaaatccttatcatgaaagac
catggatggaaagccgaaatcgaagctgtcgactctgtaggggatttcgtgataaggcaa
attttatctcagcattggcgctaa
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